| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2579 |
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| Symbol | valS |
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| ID | 4023075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2890251 |
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| End bp | 2893157 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962777 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_569710 |
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| Protein GI | 91977051 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0215604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCGT TCGCCTTTGG CGAAGCGCCC TTTTTTGATT GCATGGCCAT GATCGAGAAA
ACCTACCAGC CCGCCGAGAT CGAAGGCCGC ATCGCGCGCG CCTGGGAGGA CGCCGACGCC
TTCAAGGCCG GACGCCCCGA CCGCCGCGAC GCCGAACCCT ATTCGATCGT GATCCCGCCG
CCGAACGTGA CCGGTTCGCT GCATATGGGA CACGCGCTCA ACAACACACT GCAGGACATT
CTGTGCCGGT TCGAGCGGAT GCGCGGCCGT GACGTGCTGT GGCAACCAGG CACGGACCAC
GCCGGCATCG CGACTCAGAT GGTCGTCGAG CGGCAGTTGA TGGAGCGGCA GGAGCCGGGC
CGTCGCGAGA TGGGCCGCGC CAAGTTTTTG GAGCGGGTCT GGCAGTGGAA GGCCGAGAGC
GGCGGCGTCA TCGTCAACCA GCTGAAGCGG CTCGGGGCCT CCTGCGACTG GTCGCGCGAG
CGCTTCACGA TGGACGAGGG GCTGTCCCGC GCCGTCGTCA AGGTGTTCGT CGAGCTGCAC
CGGCAGGGGC TGATCTATAA GGACAAGCGG CTGGTCAATT GGGACCCGAA GCTGCTCACC
GCGATCTCCG ATCTCGAAGT GCAGCAGATT GAGGTCAAGG GCAATCTCTG GCACCTGCGC
TATCCGATCG AGGGCGTCAG TTTCGATCCG GAGAATCCGG CGAGCTACAT CGTGGTGGCG
ACGACCCGGC CGGAGACGAT GCTCGGCGAC ACCGCGGTGG CGGTGAATCC GGACGATGAG
CGCTATGTCG ATCTGGTCGG CAAGCACGTC ATTCTGCCGC TGGTCGGCCG GCGGATTCCG
ATCGTCGCTG ACGAATATTC CGATCCGGAG AAGGGCTCCG GCGCGGTGAA GATCACGCCG
GCGCACGATT TCAACGACTT CGAGGTCGGA AAGCGGCATC ATTTGCCGCA GATCAATGTG
CTCGACATCG AGGGCAAGAT CGCGATCGCC GACAACAGCG CCTATCTCGA AGGCCTACCC
GAGGGCGCGC GGGAATTCGC CGAAGAGATC GATGGCACCG ACCGCTTCGC CGCGCGCAAA
CTGATCGTGG GGCGGCTCGA CGAATTCGGA TTCCTCGAAA AGATCGAGCC CAACGTCCAC
ATGGTTCCGC ATGGCGACCG CTCCGGCGTG GTGATCGAAC CCTATCTGAC CGACCAGTGG
TACGTCGACG CCAAGACGAT GGCGCAGCCG GCGATCGCCG CGGTGCGCTC CGGCGCCACC
ACCTTCGTGC CGAAGAACTG GGAGAAGACC TATTACGAGT GGATGGATAA CATCCAGCCG
TGGTGCATCT CGCGGCAATT GTGGTGGGGC CACCAAATTC CGGCCTGGTA CGGCCCCGAT
GGCAAGGTGT TCGTCGCCGA GACCGAGGAA GAGGCAATCG GCAACGCGCT CGGCTATTAC
GTCGAGCAGG AAGTCATCAC GCCCGCGCAG GCGCACGAGA TGACGCAGGA CGCCAGCAAG
CGTGACGGCT TCATCACCCG CGATGAAGAC GTGCTCGACA CCTGGTTCTC CTCGGCGCTG
TGGCCGTTCT CGACACTCGG CTGGCCCGAC GAGACGTCCG AACTCGAGCG CTACTACCCG
ACAAACGTTC TCGTCACCGG CTTCGACATC ATCTTCTTCT GGGTCGCCCG GATGATGATG
ATGGGCCTGC ATTTCAAGAA CGACGTGCCT TTCCCGACGG TCTACATCCA CGCCCTCGTC
CGCGACGAGA AGGGCGCCAA GATGTCGAAG TCGAAAGGCA ACGTCATCGA TCCGCTGCAT
CTGATCGACG ACTACGGCGC CGATGCGCTG CGCTTCACGC TGGCGGCGAT GGCGGCACAG
GGCCGTGACA TCAAACTGGC GTCGAGCCGG GTCGAGGGCT ATCGCAATTT CGCGACCAAG
CTATGGAATG CCTGCCGCTT CGCCGAGATG AACGCCTGCG CCGCGCCGAT CGGCTTCGAT
TACACGACGG CGAAAGAGAC CCTGAACCGC TGGATCGCGC ACGAGACCGT GCGGGCGGTC
CGCGACGTCA CCGAGGCGAT CGAGTCGTAT CGCTTCAACG ATGCAGCGGG CGCCGCCTAT
CGCTTCGTCT GGAACGTGTA TTGCGATTGG TATCTCGAAC TCGCCAAGCC CGTCTTGATG
GGCGAGGACA GCACGGCCAA GACCGAGACC CGGGCGATGG TGGCGTGGGC GCGCGACGAG
ATTCTGAAGC TGCTGCATCC GTTCATGCCG TTCATCACCG AGGAGTTGTG GGCGGTGACG
GGCCAGCGCG ACGGCCTTCT GGTGCTGGCG CCGTGGTCCC GCAAGGCCGA ACTCAGCGTC
GAGGTTTTTG CGAGTCCGGT GCTCACCGAC CCGATGGTGC CGCCGGTGAT CCTGCCGGCG
CGGCACGACG CCGAATTCAG CGATCCGGCT GCGGAAGCCG AGATCGGCTG GGTGGTCGAT
CTGGTGACCG CGATCCGCTC GGTGCGCGCC GAGATGAACA TCGTGCCGTC GACACTGACG
CCGTTGGTGC TGGCCGGCGC GTCTGCGGAG ACCCGCGCCC GTGCCGAACG CTGGAGTGAC
GTCATCAAGC GGCTGGCGCG GGTCGGCGAG ATTTCGTTCA CCGACGCCGC GCCGCAGGGC
GCGGTACAGC TCCTGGTGCG CGGCGAGGTG GCGGCGCTGC CGCTGAAGGG CGTGATCGAT
CTTGCCGCCG AGCAGGCGCG GCTGGACAAG GAACTGGCCA AGGCGGAAGC CGACATCAAG
CGCGTCGACG CCAAGCTCTC GAACGAGAAG TTCGTCGCCA ACGCGCCGGA GGAGATCGTC
GAGGAAGAGA AGGAAAAGCG CGAGGCCGCC GTCGCGCGCA AGGTCAAGAT CCTCGAAGCC
TTGCTGCGGC TGAAGAACGC GACGTAA
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| Protein sequence | MRAFAFGEAP FFDCMAMIEK TYQPAEIEGR IARAWEDADA FKAGRPDRRD AEPYSIVIPP
PNVTGSLHMG HALNNTLQDI LCRFERMRGR DVLWQPGTDH AGIATQMVVE RQLMERQEPG
RREMGRAKFL ERVWQWKAES GGVIVNQLKR LGASCDWSRE RFTMDEGLSR AVVKVFVELH
RQGLIYKDKR LVNWDPKLLT AISDLEVQQI EVKGNLWHLR YPIEGVSFDP ENPASYIVVA
TTRPETMLGD TAVAVNPDDE RYVDLVGKHV ILPLVGRRIP IVADEYSDPE KGSGAVKITP
AHDFNDFEVG KRHHLPQINV LDIEGKIAIA DNSAYLEGLP EGAREFAEEI DGTDRFAARK
LIVGRLDEFG FLEKIEPNVH MVPHGDRSGV VIEPYLTDQW YVDAKTMAQP AIAAVRSGAT
TFVPKNWEKT YYEWMDNIQP WCISRQLWWG HQIPAWYGPD GKVFVAETEE EAIGNALGYY
VEQEVITPAQ AHEMTQDASK RDGFITRDED VLDTWFSSAL WPFSTLGWPD ETSELERYYP
TNVLVTGFDI IFFWVARMMM MGLHFKNDVP FPTVYIHALV RDEKGAKMSK SKGNVIDPLH
LIDDYGADAL RFTLAAMAAQ GRDIKLASSR VEGYRNFATK LWNACRFAEM NACAAPIGFD
YTTAKETLNR WIAHETVRAV RDVTEAIESY RFNDAAGAAY RFVWNVYCDW YLELAKPVLM
GEDSTAKTET RAMVAWARDE ILKLLHPFMP FITEELWAVT GQRDGLLVLA PWSRKAELSV
EVFASPVLTD PMVPPVILPA RHDAEFSDPA AEAEIGWVVD LVTAIRSVRA EMNIVPSTLT
PLVLAGASAE TRARAERWSD VIKRLARVGE ISFTDAAPQG AVQLLVRGEV AALPLKGVID
LAAEQARLDK ELAKAEADIK RVDAKLSNEK FVANAPEEIV EEEKEKREAA VARKVKILEA
LLRLKNAT
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