| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2571 |
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| Symbol | |
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| ID | 4023065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2880616 |
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| End bp | 2883729 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962767 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_569702 |
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| Protein GI | 91977043 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0468972 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGA TGTCCGAGCC GTTCATCCGG CGGCCGGTCG GCACCACGCT GCTGTCGATC
GGGCTGCTGC TGCTTGGAAT CGTGGCTTAC GCCTTCCTGC CGGTGGCGGC GGTGCCCAAT
ATAGACTTTC CAATGGTAAT GGTGTCGGCG TCGCGGCCGG GCGCTGCGCC TTCGGTGATG
GCGGCGACCG TCGCTGCGCC GCTGGAGCGT CGGCTCGGCG AGATCGCCGG CCTCGACAAG
ATCACCTCGA CCAGTTCGCT CGGCCAGACC CGGATCCAGT TGCAGTTCTC GCTCGGCCGC
GACATCGACC GCGCCGCGCG CGACGTCCAG GCCGCGATCA ACGCTTCGAT CAGCGACCTG
CCGACCGACC TGCCGACGCT GCCGAGATTC CGCAAGTTCA ACTCCGCGGC TGCGCCAGTG
TTCATCCTGG CTCTGACCTC GAAGACAATG CCGGCGAGCG CGATTTACGA CGTCGCCGAC
ACTGTTCTGG CGCAGCGCAT TTCGCAGGTG CCGGGCGTCG GCGACGTCAC CGTCTCGGGC
GCCGACCAGC CGGCGGTGCG GATCGCGCTC AATCCGGTCG CGCTGTCGAA CGCCGGGATC
GCCACCGATG ATGTCCGGAC CGCGATCGTC ACCGCCAATC CGGTCGGGCC GGTCGGCATC
TTCGACGGCG AACGGCAGAG CGAGACGATC TCGACCAACA GACAGATGCG GACCGCGGCT
GAATTCGGCG ACATCGTGAT CAAAAGCGCC AACGGCAACT CGCTGCGGCT GTCGGACGTC
GCCACCGTGT CGGACGCCAC CCGTAACAGC CGTCAGATCG CCTGGTACAA CAAACAGCCC
GCGGTGCTGA TCCAGATTAC CAAACAGGGT AACGCCAACG TCATCGAGAC CGTCGACCGG
GTGAAGGAAC TGCTGCCCGA GTTGAAGCGC TGGATCCCGG CGTCGGTTGA TATTTCGGTG
GTCACCGATC GCACCGGCAC GATCCGCGCC AGCGTCGACG ACATGCTGTG GACGCTGCTG
GCGACCGCCG TACTCGTGAT GGTGGTGGTG CTAACATTTT TGCGGCGGAT GACGCCGACG
ATCGCCGCCG GCGTCTCGGT GCCGCTGGCA CTCGCCGGCA CCTGCGCCGG GATGTGGCTG
ACCGGCTTCT CGATCAACAA TTTGTCGCTG ATGGCCTTGG CGATCGCGGT CGGCTTCGTC
GTCGACGACG CCATCGTGAT GATCGAGAAC ATGTACCGCA ATCTCGAGCG AGGCATGGCG
CCGATGCAAG CGGCGCTGGA GGGCGCCAAA CAGATCGGCT TTACCGTGCT GTCGATCAGC
CTGTCGCTGA TCGCGGCGTT CGCGCCGTTG ATCTTCATGG ACGGCATCGT GGGCCGGCTG
TTGCGCGAAT TCTCGCTGAC GTTGACTTAC GCGATCGTGG TCTCGACCGT GGTGTCGCTG
ACGGTGACGC CGATGATCTG CGCGCATTTC ATCCGCGTCG AGACCACGCC GCGGCAACCG
AACTGGTTCG ACCGCGTGGT CGAGGGCACG CTCGGCCGCA TCGTCAGTTT CTACGCCTGG
ACGCTGCGCG CGGTGCTCGG CTTTCCTGGG CTGACCATGC TGGTGTTTTT CGCCACCATT
GCGCTTACCG TGACGCTCTA TGTGAAGGTG CCGAAGGGCT ATTTCCCGGT CGACGATTCC
GGCTTTGTGA TCGGCTCGAC GCGCGCCTCG GCGGACGTCT CGTTCCAGTC GATGCGCAAG
CTGCAGGAGC AGCTCGCCGA CATCGTGATG GCCGATCCGG CGGTGGCCGG CGTGGGGTCT
GTGCTTGGCG GGGGCGGCGG GCCGGGCGGC GGCGGCGCAA ATCGCGGCAC GATGTTCATC
AACCTCAAGC CGCCGGCGGA GCGCGCGGGC GTCGATACCC AGCAGGTGAT CGACCGGTTG
CGGCGCAATC TCGGCAAGGT GGCCGGCATC CGGCTGTTCA TGTTCGCCGC CCAGGATCTG
CGCGCCGGCG GGCGGCAGAG CGATTCCGAT TATCAGTACA CGCTCGCCAG TCCCGATCTC
GATCTGTTGC AGAAATGGGC GCCGATCGTC GCCAAGCGGA TGCAGACCGT CGAGGGCATC
ACCGACGTGT CGAGCGATCG CGACGACGGC GGGCTGGAGC TGACGCTGTC GATCGACCGT
AACATGGCGT CGCGGCTCGG CGTCGCGGTG CAGGACATCG ACAACGCGCT CAACAACGCG
TTTTCACAGC GACAGATCGC GACGATCTAC ACCCAGCGCA ACCAGTATCA GGTGGTGATG
GAGATCGATC CGAAATTCCA GAACGACCCG ACCGATCTGG ACCGGATCTT CGTCGCCGGC
GACAATGGCG CCCAGGTGCC GCTGTCGGCC GTGGTTCGCG CGAAACGCGG GCTGTCGGCG
CTGGCGGTGT TTCATTCGCA GTCGATTCCC TCGACCACGG TGTCGTTCAA CCTGCTGCCC
GACGTGCCGC TGCAGACGGC GACTGCCAAC ATCCAGCGCG CGGTCGATGA ATTGCATATG
CCCGAAGGCA TTCGCGGCTT GTTCGACGGC AACGCCGGTG ATTTCGGCGC CACCTCGAAC
AAGCAGCCGC TGTTGATCCT GGCCGCCCTG ATTGCGATGT ACATCGTGCT CGGCGTGCTC
TACGAGAGCC TGGCGCATCC GCTGACGATC ATTTCGACGC TTCCCTCGGC CGGTCTCGGC
GCGCTGCTGG CGCTGCTGGT CACCGGCACG CAACTGACGG TGATCGCGTT CGTCGGCATC
ATTATGCTGA TCGGCATCGT CAAGAAGAAC GGAATCATGA TGGTGGATTT TGCGCTGGAG
GCCGAACGCA TGCGCGGGAT GTCGTCTGCG GACGCGATCT TCGAGGCCTG CATTGTCCGC
TTCCGGCCGA TCCTGATGAC CACCATGGCG GCCTTGTTCG CCGCGATCCC GCTGGTCGTG
GCGGTCGGGC CGGGCACCGA GTTGCGGCGG CCGCTCGGCA TCACCATCAT CGGTGGGCTG
TTCGTGTCGC AGGTGCTGAC GCTGTACACG ACGCCGGTGA TCTATCTGTT GATCGACCGA
ATGCGGCAGC GGCGCAAACC CAAACCCACA CCCGTCGCTG TGCCGGCGGA ATAG
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| Protein sequence | MASMSEPFIR RPVGTTLLSI GLLLLGIVAY AFLPVAAVPN IDFPMVMVSA SRPGAAPSVM
AATVAAPLER RLGEIAGLDK ITSTSSLGQT RIQLQFSLGR DIDRAARDVQ AAINASISDL
PTDLPTLPRF RKFNSAAAPV FILALTSKTM PASAIYDVAD TVLAQRISQV PGVGDVTVSG
ADQPAVRIAL NPVALSNAGI ATDDVRTAIV TANPVGPVGI FDGERQSETI STNRQMRTAA
EFGDIVIKSA NGNSLRLSDV ATVSDATRNS RQIAWYNKQP AVLIQITKQG NANVIETVDR
VKELLPELKR WIPASVDISV VTDRTGTIRA SVDDMLWTLL ATAVLVMVVV LTFLRRMTPT
IAAGVSVPLA LAGTCAGMWL TGFSINNLSL MALAIAVGFV VDDAIVMIEN MYRNLERGMA
PMQAALEGAK QIGFTVLSIS LSLIAAFAPL IFMDGIVGRL LREFSLTLTY AIVVSTVVSL
TVTPMICAHF IRVETTPRQP NWFDRVVEGT LGRIVSFYAW TLRAVLGFPG LTMLVFFATI
ALTVTLYVKV PKGYFPVDDS GFVIGSTRAS ADVSFQSMRK LQEQLADIVM ADPAVAGVGS
VLGGGGGPGG GGANRGTMFI NLKPPAERAG VDTQQVIDRL RRNLGKVAGI RLFMFAAQDL
RAGGRQSDSD YQYTLASPDL DLLQKWAPIV AKRMQTVEGI TDVSSDRDDG GLELTLSIDR
NMASRLGVAV QDIDNALNNA FSQRQIATIY TQRNQYQVVM EIDPKFQNDP TDLDRIFVAG
DNGAQVPLSA VVRAKRGLSA LAVFHSQSIP STTVSFNLLP DVPLQTATAN IQRAVDELHM
PEGIRGLFDG NAGDFGATSN KQPLLILAAL IAMYIVLGVL YESLAHPLTI ISTLPSAGLG
ALLALLVTGT QLTVIAFVGI IMLIGIVKKN GIMMVDFALE AERMRGMSSA DAIFEACIVR
FRPILMTTMA ALFAAIPLVV AVGPGTELRR PLGITIIGGL FVSQVLTLYT TPVIYLLIDR
MRQRRKPKPT PVAVPAE
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