| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2570 |
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| Symbol | |
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| ID | 4023064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2877491 |
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| End bp | 2880616 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962766 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_569701 |
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| Protein GI | 91977042 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0830521 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCT CCGAGCCGTT CATCCGGCGC CCGATCGCGA CCTCGCTGCT CGGCGTGGCG
CTGCTGATCG GCGGCCTGCT CGGCTATTTC TCGCTGCCGG TGTCGGCGTT GCCGCAGGTC
GATTTCCCGA CCGTGCAGGT GACGACGCAA CTGCCGGGCG CGAGCCCGGA CGTAGTCGCG
TCACTGATCA CCGCGCCGCT GGAGCGGCAG CTCGGCCAGA TCCCGTCGCT GACGGCGATG
ACCTCGACCT CGTCGCTCGG CGTCAGTCAG GTGTCGCTGC AATTCGACCT CAATCGCGAT
ATCGACGGCG CCACCCAGGA TGTGCAGGCG GCGATCAACG CCGCCGCGGG CATCCTGCCG
AAGAACCTGC CGTATCCGCC GACCTACGCC AAGGTGAACC CGGCCGACGC GGCGGTGATG
ACGCTGGCGC TGACCTCGAC CACGGTGTCG CTGCGATCGA TGAGCGACCT CGCCGATACG
ATTCTGGCGC AACGACTTGC CCAGATCAGC GGCGTCGGCC GGGTGTCGGT GCTCGGCGGG
CTGAAGCCCG CGGTCCGGGT CCAGGCCGAT CTCGCCCGGC TCGCCGCTTA CGGAATTTCG
ATGGAGGATT TGCGCACGGC GATCGCCGGC GCCAACGTCT CCGGGCCGAA GGGCTCGCTC
GACGGCGCGC AGCAGGCCTA CACCATCGCC GCCAACGACC AGATCGGTGC GGCTGATGCC
TACAAGTCGA TCATCGTCGC CTATCGTAAC GGCTCGCCGG TGACGATCGG CGACGTCGCG
CAGATCATCG ACGGGCTGGA AAACAACCGC ACCGGGGCCT GGTACCAAGG CACGCCGGCG
GTGATCCTCG ACATCCAGCG CCAGCCTGGC GCAAACGTCA TCGACGCGGT CCGCGGCATC
CGCAACGAGA TCCCCAAGCT GCAGAGGATG ATCCCGGCCG GCGTCAAGCT GACCGTGGTC
AGCGACCGCA CCGAAACGAT CCGCGCCTCG GTGAACGACG TGCAGTTCAC GCTGCTGCTC
AGCGTCGGCC TCGTGACGCT GGTGGTGCTG CTGTTCCTGC GCTCGATGCG GGCCACGATC
ATCGCCGGCG TTGCGCTGCC GCTGTCGCTG ATCACCTCGT TCGGGGTGAT GTATTTCGCC
GGCTTCAGCC TCGACAATCT GTCCCTGATG GCGCTGACCA TCGGCACCGG CTTCGTCGTC
GACGACGCCA TCGTCATGAT CGAGAACATC GTCCGGCATA TGGAGGAGGG CGAGAGCCCG
ATGCAGGCGG CGCTCTCGGG CGCCAGCGAG ATCGGCTTCA CCGTAATCTC GCTGACGATG
TCGCTGATCG CCGTGTTCAT CCCGCTGCTG TTCATGTCCG GGCTGGTCGG GCGGATGTTC
CGCGAATTCG CGCTGACGCT GACGATCGCG GTGGTGACCT CCGCGGTGGT GTCGCTGACG
CTGACGCCGA TGATGTGCTC GCGGCTGCTC AAGCACGCCG GCGAGGAGCG TCGCGTGCCC
GGCCTCGCCA CCATCAGCGG CTGGATCGAC CGCGGCGCCG AGGCCTATCA CCGCAGCTTA
CTGTGGGTGC TGCAGCGCCA GCGCGCGACG CTGGTGGTGA CCTTTCTCAC CATCGCCGCA
ACGGGGGTTC TCTATGTGAT CGCCCCGAAA GGCTTCCTGC CGCTGCAGGA CACCGCCGCG
ATCACCGCGG TGACCGAGGC CGGGCAGGAT GTGTCGTTCG CGGAAATGCA GGCGCGGCAG
TCCGCGGCGG CCGACGCGAT CAAGGCCGAT CCGGATGTCG TCGGCGTGGT GTCGGTGATC
GGCGCCGGCT CCGTCAATCC GACCACCAAT GTCGGGCGTC TGGTGATGAC GCTGAAGCCG
CGCGGCGAAC GCAAGGCCGG CGTCGCCGAG GTGATCGAGC GGCTGAAGCA GCGGGTCGCG
TCAATCCCCG GCATGACGGT GTACTTCCAG GCCGTGCAGG ACGTGCAGAT CTCGACCCAG
GCGAGCCGCT CGCAATACCA ATACACGCTG ACCGCGACCG ACGCGGCGCT GCTGTCGGAA
TGGGCGAAAA AGCTGGTCGC AGAATTGCGC GACGATCCGC TGTTTCGCGA TGTCTCGTCG
GAAGCGCAGG AGGGCGGTCT GCGCGCCGCG CTCGACATCA ACCGGCAGCG CGCCGGCCAG
CTCGGCGTCA GCATTCAGGC GATCAACGAC ACGCTCAACG ATGCCTTCGC GCAACGGCAG
ATCTCGACGA TCTACGGCCA GGCCAACCAG TATCGCGTGG TGCTGGAGGC GATGCCGGTC
TATCAGAAGG ATCCGTCGAT CCTGTCGAAG CTCTACGTGC CCGGCACTGG CGGCGCGCAG
GTGCCGATCT CGGCGGTGGC CGAACTGAAA CGGACCACCG CGCCGCTGGT GATCTCGCAT
CAGGCGCAAT TCCCCTCGGT CGCGCTCAGC TTCAATCTCG CGCCAGGTGC ATCACTCGGC
GAGGCGGTGA ACGAGATCAA GGTGATCGAG ACCCGGATCG GGATGCCCGG CAGTATCGTC
GGCGTGTTCT ACGGCGACGC CGCCGAGTTC TCGAAATCGC TGTCCGGCCA GGTCTGGTTG
ATCCTCGCCG CGCTGGTGAC GATCTACATC GTGCTCGGCG TGCTGTATGA GAGCTTCATT
CACCCGATCA CCATTCTGTC GACATTGCCC TCGGCCGGGG TCGGCGCGAT CCTGGCGCTG
ATGCTGTTCG GGCAGGACCT TTCGGTGATC GGGCTGATCG GCATCATCCT GTTGATGGGG
ATCGTCAAGA AGAACGCGAT CATGATGATC GACTTCGCGC TCGAGGCCGA GCGCGCAAGG
GGGATGTCGT CCTACGACGC GATCGTGCAG GCCTGTCTGC TACGTTTCCG GCCGATCATG
ATGACCACGC TGGCGGCGCT GTTCGGCGCG CTGCCGCTCG CGGTCGAAAG CGGCACCGGC
TCCGAGCTGC GGTTTCCACT CGGCATCTCG ATCATCGGCG GTCTGCTGCT CAGCCAGTTG
CTGACGCTGT ACACGACGCC GGTGATCTAT CTCGCGCTCG ACCGGATCAA CCGCCGGTTC
GAGAAGGCGG TGCCGCCGGC GACACCGTCG CCGCCGCTCG CCGGGCCGGC GGGGGAGACG
CCGTAA
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| Protein sequence | MSVSEPFIRR PIATSLLGVA LLIGGLLGYF SLPVSALPQV DFPTVQVTTQ LPGASPDVVA
SLITAPLERQ LGQIPSLTAM TSTSSLGVSQ VSLQFDLNRD IDGATQDVQA AINAAAGILP
KNLPYPPTYA KVNPADAAVM TLALTSTTVS LRSMSDLADT ILAQRLAQIS GVGRVSVLGG
LKPAVRVQAD LARLAAYGIS MEDLRTAIAG ANVSGPKGSL DGAQQAYTIA ANDQIGAADA
YKSIIVAYRN GSPVTIGDVA QIIDGLENNR TGAWYQGTPA VILDIQRQPG ANVIDAVRGI
RNEIPKLQRM IPAGVKLTVV SDRTETIRAS VNDVQFTLLL SVGLVTLVVL LFLRSMRATI
IAGVALPLSL ITSFGVMYFA GFSLDNLSLM ALTIGTGFVV DDAIVMIENI VRHMEEGESP
MQAALSGASE IGFTVISLTM SLIAVFIPLL FMSGLVGRMF REFALTLTIA VVTSAVVSLT
LTPMMCSRLL KHAGEERRVP GLATISGWID RGAEAYHRSL LWVLQRQRAT LVVTFLTIAA
TGVLYVIAPK GFLPLQDTAA ITAVTEAGQD VSFAEMQARQ SAAADAIKAD PDVVGVVSVI
GAGSVNPTTN VGRLVMTLKP RGERKAGVAE VIERLKQRVA SIPGMTVYFQ AVQDVQISTQ
ASRSQYQYTL TATDAALLSE WAKKLVAELR DDPLFRDVSS EAQEGGLRAA LDINRQRAGQ
LGVSIQAIND TLNDAFAQRQ ISTIYGQANQ YRVVLEAMPV YQKDPSILSK LYVPGTGGAQ
VPISAVAELK RTTAPLVISH QAQFPSVALS FNLAPGASLG EAVNEIKVIE TRIGMPGSIV
GVFYGDAAEF SKSLSGQVWL ILAALVTIYI VLGVLYESFI HPITILSTLP SAGVGAILAL
MLFGQDLSVI GLIGIILLMG IVKKNAIMMI DFALEAERAR GMSSYDAIVQ ACLLRFRPIM
MTTLAALFGA LPLAVESGTG SELRFPLGIS IIGGLLLSQL LTLYTTPVIY LALDRINRRF
EKAVPPATPS PPLAGPAGET P
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