| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2565 |
|---|
| Symbol | |
|---|
| ID | 4023059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 2870732 |
|---|
| End bp | 2871961 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637962761 |
|---|
| Product | cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_569696 |
|---|
| Protein GI | 91977037 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.606524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.384966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC TGGTGCTGCT GACTCCCGAC AATGTGAATG CGAAGCTTGC CGGCCTGCCC
CGCGTCGTGC GGCTGGCGCT GGCGTACGGT GCGCGGCTGA GACGCGGCAC GCTGGATGTC
ACCCTGCCCG ACGGCCGCCG TTTTCGCATG GGCGGCGCCG AGCCCGGCCC TGCCGCCGAA
ATGCGGCTGC ACAGCTATGC CTTCGCCTCG CGGCTGATCA ACGGCGGCGA CATCGGGATC
GCCGAAGCCT ATCTCAACGG CGATTGGGAT ACGCCGGACC TGACACAGTT CCTGTATCTG
TTCTGCGTCA ATCACGAGAT GATCCAGGCG ATGCTCGGCG ACAATCCGAT GATGCGGTTC
GCGCAGATCG TCCGCCACTG GTTCAACCGC AACACCAAGC GCCAGGCGAG GCGCAACATC
TACGCCCATT ACGACATCGG CAATGCGTTC TACTCGGCCT GGCTCGATCC GAGCATGACC
TATTCCTCGG CGCTGTTCGA GGAACACACC CACGACCTCA CCGCCGCCCA GATCAACAAA
TATCAGCGCC TCGCGGAAGC GATCGACCTG AGGCCCGGCC AGAAGCTGCT GGAGATCGGC
TGCGGTTGGG GCGGCTTCGC CGAATACGCC GCAAAGAATT TCGACGCCCG CGTTGTCGGC
CTCACCATCA GCAAGGAACA GCGCGACTTC GCCCAGGAGC GGATGCAACG CGCGGGCCTC
GCCGACAAGG TTGAAATCCG GCTGCAGGAC TACCGCGACG AGCGCGGCCA ATACGACAGG
ATCGCGTCGA TCGAAATGAT CGAGGCGGTC GGTGAGCAAT TCTGGCCGCG ATACTTCTCA
CAATTGCGCG ACCGGCTGCT GCCCGGCGGT CTGGTCGGGA TCCAGGCGAT CACCATCCAG
GATCGCTTCT TTCAGGCCTA TCGCCGCGAG GTCGATTTCA TCCAGCGCTA CGTCTTTCCC
GGCGGAATGC TGCCGTCGCC CGAGATCCTG AAATCGCTCG GCGAGAAATT CGGCGTACCG
GTGGTTCGCG AGCGCATTTT CGGAGAAGAT TATGCCAAGA CTCTCGTGAC GTGGAGAGAT
AATTTCCGCG CAGCGTGGCC GAACCTCACG CCGCTGGGTT TCGATGAGCG CTTCCGTCGG
CTGTGGGAGT ACTACCTCGC TTATTGCGAG GCCGGCTTCC TCTCCGGCAA CATCGACGTG
CGCCAGGTCG TGTTCGCAAA GGCGAGCTGA
|
|---|
| Protein sequence | MSELVLLTPD NVNAKLAGLP RVVRLALAYG ARLRRGTLDV TLPDGRRFRM GGAEPGPAAE
MRLHSYAFAS RLINGGDIGI AEAYLNGDWD TPDLTQFLYL FCVNHEMIQA MLGDNPMMRF
AQIVRHWFNR NTKRQARRNI YAHYDIGNAF YSAWLDPSMT YSSALFEEHT HDLTAAQINK
YQRLAEAIDL RPGQKLLEIG CGWGGFAEYA AKNFDARVVG LTISKEQRDF AQERMQRAGL
ADKVEIRLQD YRDERGQYDR IASIEMIEAV GEQFWPRYFS QLRDRLLPGG LVGIQAITIQ
DRFFQAYRRE VDFIQRYVFP GGMLPSPEIL KSLGEKFGVP VVRERIFGED YAKTLVTWRD
NFRAAWPNLT PLGFDERFRR LWEYYLAYCE AGFLSGNIDV RQVVFAKAS
|
|---|
| |