| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2558 |
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| Symbol | |
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| ID | 4023052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2863703 |
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| End bp | 2864719 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962754 |
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| Product | lysine-arginine-ornithine-binding periplasmic protein |
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| Protein accession | YP_569689 |
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| Protein GI | 91977030 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTG TATCTCTCGC TGCTGCCGTC GCCATCACCG CCTGCTTCGC GGCCCAGAGC
GCCGGCGCCC AGACGCTCAA GACCGTCAAG GATCGCGGGT TGCTGTCCTG CGGCGTCAGC
CAGGGCCTGC CGGGATTCTC GGCGCCCGAC GACAAGGGCA ACTGGACCGG CCTCGACGTC
GATTTGTGCC GCGCCGTCGC CGCGGCGATC TTCGACGATC CCTCCAAGGT CAAATTCGTG
CCGCTGTCGG CCAAGGATCG ATTCACGGCA CTGCAATCCG GCGAGATCGA CGTGCTTTCG
CGCAATACCA CCTGGACGGT GTCTCGGGAC ACCTCGCTCG GCGTCAACTT CGCCGGCGTG
AGCTATTACG ACGGGCAGGG CTTCCTGGTG AAGAAGGCGC TCAAGGTCAA TTCGGCGCTC
GAGCTGAACA GCGCTTCGAT CTGCGTGCAG ACCGGCACCA CCAACGAGCA GAACGTCGCC
GACTACTTCA AAGGCAACAA CATGAAGTAC GAGGTGATCG CCTTCGCCAA CGCCGACGAG
GCGATCAAGG CCTACGAATC CGGCCGCTGC GACGTATTCA CCTCCGATGT CTCGCAGCTC
TACGCCCAGC GGCTGAAAGT GACCACGCCG GCCGACCATG TCGTGCTGCC GGAAGTGATT
TCGAAGGAGC CGCTCGGGCC GCTGGTCCGC CACGGCGACG ACCAGTGGTT CGACATCGTG
AAATGGACGC TGTTCGCGCT GGTCAACGCC GAGGAGCTTG GCGTCACCCA GAGCAATGTC
GGCGAGATGG CCAAGTCGGA CAAGCCGGAA TTGAAGCGCG TGTTCGGCTC AGATGGAAAC
CTCGGTGAGC AACTTGGCCT GACCAAGGAT TGGGTTGCCC GCATCGTCAA GGCGACCGGC
AATTACGGCG AATCGTTCGA ACGCAACGTC GGCACCGGCT CCAAGCTCGA GATCGCCCGG
GGGCTCAACA AGCTGTGGAA CAAGGGCGGC ATCATGTACG CGCCGCCGAT CCGCTGA
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| Protein sequence | MKRVSLAAAV AITACFAAQS AGAQTLKTVK DRGLLSCGVS QGLPGFSAPD DKGNWTGLDV
DLCRAVAAAI FDDPSKVKFV PLSAKDRFTA LQSGEIDVLS RNTTWTVSRD TSLGVNFAGV
SYYDGQGFLV KKALKVNSAL ELNSASICVQ TGTTNEQNVA DYFKGNNMKY EVIAFANADE
AIKAYESGRC DVFTSDVSQL YAQRLKVTTP ADHVVLPEVI SKEPLGPLVR HGDDQWFDIV
KWTLFALVNA EELGVTQSNV GEMAKSDKPE LKRVFGSDGN LGEQLGLTKD WVARIVKATG
NYGESFERNV GTGSKLEIAR GLNKLWNKGG IMYAPPIR
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