| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2557 |
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| Symbol | |
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| ID | 4023051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2862171 |
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| End bp | 2863370 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962753 |
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| Product | cystathionine beta-lyase |
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| Protein accession | YP_569688 |
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| Protein GI | 91977029 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCTT CCAATCACGA CGGAACACAA CCGTCGCTCA GCCCGCAGAC CCGGCTCGTG
ACGTCGGGGC GCGACACCAA GGCGCAGAAG GGTTTCGTCA ATCCTCCGGT GGTGCGCGGT
TCGACCGTGC TTTACCCGAC CGCAGAAGAC CTGCATGCAC ATCGCGGCGA GTACTCGTAC
GGGCGTCACG GCACGCCGAC CACAAAGGCT TTGCAGCAGG CGCTGATCGA GCTGGAAGGT
CCGCAATGCG CCGGCGTCGG ACTGACGCCT TCCGGCGTGT CCGCGATTTC GACCGCCCTG
CTCGCGGTGC TCAAGGCCGG CGATCATGTC CTGGTTTGTG ACAACACCTA CCGCCCGACG
CGGCTGCTCT GCGACCAAAT GCTGCAACGC TACGGTATCG AGACCAGCTA TTTCGATCCG
CTGATCGGCG CCGGCATCGC CGCCCATATC CGGCCGAACA CCGCCGTGGT GATGGTCGAG
GCGCCAGGCT CGCAATCCTT GGAGATGCCG GACATTCCGG CGATCGCCGC GGTCGCGCAC
GCGCATGGCG CGCTGGTGAT CGACGACAAT ACCTGGGCGA CCCCGCTGTA TCATCGCTCC
CTCGAGCAGG GCGTCGATAT TTCGATCCAG GCCGGCACCA AGTATATCGG CGGCCATTCC
GACATCATGT TCGGCACGAT CGCCGCCAAC AAGACGGCGT GGCCGAAGAT CGCAGACGCG
ATCCGCCTGC TCGGCGTCTG CGCCGGACCT GACGATGTGT TCCTGGCGTT GCGCGGCCTG
CGCACGCTCG CGGTGCGGCT GGCGCAGCAT CAGCAGTCCG GTCTGGAGAT GGCGCGCTGG
CTCGGCGAAC GGCCCGAGGT GCAGCGGGTT CTGCATCCGG CGCTGGAGAG CGATCCGGGA
CACGCGATCT GGAAGCGCGA CTTTACCGGC GCGTCCGGTT TGTTCTCGAT CGTGCTGCAG
CCAGCCCCGC AAAAGGCGGT CGACGCCCTG CTCGACACCG TCAAGCTGTT CGGCATGGGC
TATTCGTGGG GCGGCTTCGA GAGCCTTGTC ATCCCGTTCG ACTGCGCGTC CTATCGCACG
GCGACGACAT GGAATCCCGG CGGACCGGCG CTGCGGCTCC ATGTTGGCCT CGAATGCGTC
GACGACCTGA AGGCCGATCT CGCACGCGGC TTCGAGGCCT TCAACGCGTC GCTGCGTTGA
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| Protein sequence | MDPSNHDGTQ PSLSPQTRLV TSGRDTKAQK GFVNPPVVRG STVLYPTAED LHAHRGEYSY
GRHGTPTTKA LQQALIELEG PQCAGVGLTP SGVSAISTAL LAVLKAGDHV LVCDNTYRPT
RLLCDQMLQR YGIETSYFDP LIGAGIAAHI RPNTAVVMVE APGSQSLEMP DIPAIAAVAH
AHGALVIDDN TWATPLYHRS LEQGVDISIQ AGTKYIGGHS DIMFGTIAAN KTAWPKIADA
IRLLGVCAGP DDVFLALRGL RTLAVRLAQH QQSGLEMARW LGERPEVQRV LHPALESDPG
HAIWKRDFTG ASGLFSIVLQ PAPQKAVDAL LDTVKLFGMG YSWGGFESLV IPFDCASYRT
ATTWNPGGPA LRLHVGLECV DDLKADLARG FEAFNASLR
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