Gene RPD_2549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2549 
Symbol 
ID4023042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2848236 
End bp2848979 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID637962744 
Producthypothetical protein 
Protein accessionYP_569680 
Protein GI91977021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTAG CGAACTCCGT CGCGTATTTG CCGACCGATA CGTTGAAGCC CGTCGCGGAC 
GACGTCTGGA TCGTCGACAG CGGCCCGCTC AGCGCGATGG GGCTGGAGGT TCCGGTGCGC
ATGACGGTGG TCCGGCTGGC CTCGGGCGAG GTCTGGCTGC ATTCGCCGAC GTCCTGTTCC
AATCATCTGA AAGCCGCGAT CGAGCGTCTC GGGCCGATTG CGCATCTCGT CGCGCCGAAC
ATCGCGCACT GGCAGTTTGT GAAGGGCTGG AAAGACCGCT GTCCGGACGC GAAGACCTGG
GCCGTCCCGG GCCTGCGGAC GCGCGCGCCG GTCATCAAGT CGGGCGTGGT GCTGGACCAG
GACCTCGGCG AATCGCCGCC GGGCGCATGG GCCGCCGATC TCGATCAGTT GCTGATCACC
GGCGGCTTCG GCGTCAACGA AGTCGCGTTC TTTCATCGCG CGACGAAGAC GCTGATCCTG
ACCGATTTCG TCGAGAACCT CGAGCCCGCG AAGCTCGGCC CGGTGGCCGG TCCGCTGGCG
TGGCTGGCGG GTGCGACGTC GCCCGACGGC ATGGCGCCTG CGCATTATCG CTTTGCGATG
AACCGGCGCC GCGACGCCGT CAGAGACACC GCGCGCCATC TGCTGGGGTG GAGACCGGAG
CGCGTGATCT TCGCCCACGG CAGCTGGTTC GAAACCGACG GCACAAAGCG CCTGCGGCAT
TCGCTGCGCT GGCTGCTGGG CTGA
 
Protein sequence
MSVANSVAYL PTDTLKPVAD DVWIVDSGPL SAMGLEVPVR MTVVRLASGE VWLHSPTSCS 
NHLKAAIERL GPIAHLVAPN IAHWQFVKGW KDRCPDAKTW AVPGLRTRAP VIKSGVVLDQ
DLGESPPGAW AADLDQLLIT GGFGVNEVAF FHRATKTLIL TDFVENLEPA KLGPVAGPLA
WLAGATSPDG MAPAHYRFAM NRRRDAVRDT ARHLLGWRPE RVIFAHGSWF ETDGTKRLRH
SLRWLLG