Gene RPD_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2548 
Symbol 
ID4023041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2847607 
End bp2848086 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID637962743 
Producthypothetical protein 
Protein accessionYP_569679 
Protein GI91977020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCG ACGATTTCAA GGGCACGACG CCCGCGTTCC TGCCCGAGGA ATTCTTCAAC 
GGCCGGCTGG AAGGCTGGGG CGTGCTGGAG AGCCTGATCG GCGGGCTGCA GAAGCGCAGC
ACGATCGAGG CCGAAGGCAA ATGGGACGAG CAGACCCAGT CGGTGCATTT CACCGAGACC
TACCGGTTCG ACGACGGCCA CGTCGACACG CTGCACTGGA CTATCCGCAA GCTCGCGCCG
GGCAGCTACA GCGGCGCAGA GCCGACGCTT GACGGCGAGG CCAAGGGCGA ACAGGCCGGC
TGCGCCTTCC ACTGGGAGTA CACCCGCGAA ACGCCGCAGC CGGACGGTTC GACCACCAAG
CTCAATTTCG ACGACTGGTT CTACCGGATC GACGACAACG CCTGCATGGT GCGCGGCAGC
GCCGGCCGCG CCGGCATTCC ATTCGCGACC GCGCATGTCA CCTACCGCAA GCTGAGCTAA
 
Protein sequence
MSIDDFKGTT PAFLPEEFFN GRLEGWGVLE SLIGGLQKRS TIEAEGKWDE QTQSVHFTET 
YRFDDGHVDT LHWTIRKLAP GSYSGAEPTL DGEAKGEQAG CAFHWEYTRE TPQPDGSTTK
LNFDDWFYRI DDNACMVRGS AGRAGIPFAT AHVTYRKLS