Gene RPD_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2540 
Symbol 
ID4023033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2841746 
End bp2842210 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID637962735 
Productpeptidylprolyl isomerase 
Protein accessionYP_569671 
Protein GI91977012 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTCG CTTCCCGCGC CGGCGCCACG CTGGCCTTCG CACTCGTCGC GGCGCTCACC 
GCAACCGCGA CCCTGACAAC GAGTACCCCC GCAATGTCCG AGACCGCCAA AACCGTCACC
ACGCCGTCCG GCCTCAAGGT CGAGGATTCA CAGGTCGGCA CCGGTGCGTC GCCCGCGCGC
GGCCAGATCT GCGTGATGCA CTACACCGGC TGGCTGTACG AGAATGGCGT CAAGGGCAAG
AAGTTCGACT CGTCGGTCGA TCGCAACGAG CCGTTCGAAT TCCCGATCGG GATGGGCCGC
GTGATCAAGG GCTGGGACGA GGGGGTTGCG AGCATGAAGG TCGGCGGCAA GCGCACGCTG
ATCATTCCGG CCGAACTCGG CTATGGCGCC CGCGGCGCCG GCGGCGTGAT CCCGCCGAAC
GCCACCCTGA TCTTCGAGGT TGAACTGCTC GGCGTGAAGG GCTGA
 
Protein sequence
MPFASRAGAT LAFALVAALT ATATLTTSTP AMSETAKTVT TPSGLKVEDS QVGTGASPAR 
GQICVMHYTG WLYENGVKGK KFDSSVDRNE PFEFPIGMGR VIKGWDEGVA SMKVGGKRTL
IIPAELGYGA RGAGGVIPPN ATLIFEVELL GVKG