Gene RPD_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2534 
Symbol 
ID4023027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2835924 
End bp2837528 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content66% 
IMG OID637962729 
Productpropionyl-CoA carboxylase 
Protein accessionYP_569665 
Protein GI91977006 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTC ATTCCAAGAT CGATCCGGGC TCAGCCGAGT TCGCGCGCAA TGCCGAGACC 
ATGCGCGCGC TGGTCGGAGA GCTGAAGGAC AAGCTCGACA ACGTCGCCGG AGCCGGCGGC
GAGGCCTCTC GCGCCAAGCA TACCGCGCGC GGCAAGCTGC TGGCGCGCGA CCGTGTCGAC
CTGCTGCTCG ACCCCGGCAC CGCGTTTCTG GAATTGTCGC CGCTCGCCGC CTACGGGCTG
TATGGCGGCG ACGTGCATTC CGCCTCGGTG GTCACCGGCG TCGGCCGGGT GGCGGGGCGC
GAATGCATGA TCGTCGCCAA TGACGCCACG GTGAAGGGCG GCACCTATTA TCCGATGACG
GTGAAGAAGC ATCTGCGCGC GCAGGATATC GCGCGGCAGA ACAATCTGCC GTGCATCTAT
ATGGTCGATT CCGGCGGCGC GTTCCTGCCG CAGCAGGACG AGGTGTTTCC CGACGAGCGG
CATTTCGGCC GGATCTTCTA CAACCAGGCG CAGATGTCGG CGCAGGGCAT TCCGCAGATC
GCGATCGTGA TGGGCTCGTG CACCGCCGGC GGCGCCTATG TGCCGGCGAT GTCGGACGAG
AGCATCATCG TCCGCAATCA GGGCACCATC TTCCTCGGCG GCCCGCCGCT GGTGAAGGCG
GCGACCGGCG AGGTGGTCAG CGCCGAGGAG CTCGGCGGCG CCGACGTGCA TTCGCGCCAG
TCCGGCGTGA CCGATCACTA CGCCCAGAAC GACGCCCACG CCATCGGCAT CGCCCGCAGG
ATCGTCGGCA CCTTGAAACC GCCGCAGCGG CCGCCGCTGA ACATGCGCGC GCCGCGCGAG
CCGCTGTATC CGGCCGAGCA GCTCTATGGC ATCGTCCCGG CCGAGCAGCG CAAGCCGTTC
GACGTTCGCG ACATCATCAC CCGGATCGTC GACGGCTCCG AATTCGACGA GTTCAAGAAA
CTTTACGGCC AGACGCTGGT GTGCGGCTTC GCGCATATCT GGGGCTATCC GGTCGGCATC
ATCGCCAATA ACGGCATTCT GTTCAGCGAG TCTTCGCTGA AGGGCGCGCA TTTCATCGAG
CTGTGCTGCC AGCGCGGCAT TCCGCTGGTG TTCCTGCAGA ACATCACCGG CTTTATGGTC
GGCAAGAAAT ATGAGGCCGG CGGCATCGCC CGCGATGGCG CCAAGCTGGT CACCGCGGTC
GCCACCGCCA ACGTGCCGAA ATTCACCGTG GTGATCGGCG GCTCCTACGG CGCCGGCAAT
TACGGCATGT GCGGCCGGGC CTATTCGCCG CGGTTCCTGT GGATGTGGCC GAATGCGCGA
ATCTCGGTGA TGGGCGGCGA ACAGGCGGCG ATGGTGCTGA GCAGCCTCCG CCGCGACAAC
ATCGAGGCCA AGGGCGGCAG CTGGAGCGCG GAGGAGGAAG AGGAATTCCG CAGCCCGATC
CGCGCGCAAT ACGAAACGCA AGGCAGCCCG TATTACGCCA CTGCGCGGCT GTGGGACGAC
GGCGTGATCG ATCCCGCCGA TACGCGGCTG GTGTTGGGGC TCGGACTCGC GGCTTCGGCG
AATGCGCCGA TCGAGCCGAC GAAGTTCGGC CTGTTCAGGA TGTGA
 
Protein sequence
MSLHSKIDPG SAEFARNAET MRALVGELKD KLDNVAGAGG EASRAKHTAR GKLLARDRVD 
LLLDPGTAFL ELSPLAAYGL YGGDVHSASV VTGVGRVAGR ECMIVANDAT VKGGTYYPMT
VKKHLRAQDI ARQNNLPCIY MVDSGGAFLP QQDEVFPDER HFGRIFYNQA QMSAQGIPQI
AIVMGSCTAG GAYVPAMSDE SIIVRNQGTI FLGGPPLVKA ATGEVVSAEE LGGADVHSRQ
SGVTDHYAQN DAHAIGIARR IVGTLKPPQR PPLNMRAPRE PLYPAEQLYG IVPAEQRKPF
DVRDIITRIV DGSEFDEFKK LYGQTLVCGF AHIWGYPVGI IANNGILFSE SSLKGAHFIE
LCCQRGIPLV FLQNITGFMV GKKYEAGGIA RDGAKLVTAV ATANVPKFTV VIGGSYGAGN
YGMCGRAYSP RFLWMWPNAR ISVMGGEQAA MVLSSLRRDN IEAKGGSWSA EEEEEFRSPI
RAQYETQGSP YYATARLWDD GVIDPADTRL VLGLGLAASA NAPIEPTKFG LFRM