| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2518 |
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| Symbol | |
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| ID | 4023009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2818130 |
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| End bp | 2819269 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637962711 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_569649 |
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| Protein GI | 91976990 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.554546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.644499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGG CCATCTTCGG CGTCTACATG TTGCTGATCT GGCTGATATT CGCCAAGCTG
AAACTTATTC GACTCAGCCT TCCTATCGCA CTCGTTCTGG CAGCAGTTGG CCCCGCCTTC
GCATTCTTCA TTCTGCTGTC GATGAACAAC TATCACCCAT CGTCATCCGA CGCCCGGGTG
TTCCAGCGCA TTGTTCAGAT CGTCCCGCAC ATCACGACGC CGGGGCGGGT CGCGGAAATC
GTCGCGCAGC CGAATGCGCC GTTGAAGAAG GGAGACGTGA TATTCAGAAT CGATCCGCAA
CCATTTCAAT TCGAGATCGA CCGGCTGCAA GCGGCGCTGG CGGCGGCGCA GCAGAACGTC
CCGCAACTTA AATCTTCGTT CGATCAGGCC TCCGCGGGAG TCGAAAAGGC GACCGCGCAG
TACAATCTGG CGAAGGCGGA TCTGCAGCGG CAGCAGGACT TGTTCAGCAA GCAGGTGGTC
GCGCAGGCGG CCCTCGATCG CGCCCAGCGC AATGCCGAAA CTGCAGAACA GGTCGTGGCC
GAAGCCAGCG CAGCCGAAAA TCGGGCCCGG CTCGCCTATC AGTCCAACAT CGGCAGCGAC
AATACGGCGG TGGCGCAGGC ACGCCAACAA CTCGCGGCTG CAACATATAA TCTCGACGAG
TCGATCGTTC GCGCGCCATG CGACGGCTAT GCGGTCAATT TGCAGCTTGT GCCGGGCGCC
ATTGTCAGCG CCGCCGCGTC GGTGCTGCCG TTCGTATGCG ACCGCGACCA GGCCAATCTG
GGCATGGTGG TCGCATCCTT CATGCAGGGA CCGTACCTTC AGATCAGGCC CGGCGAATAT
GCCGAGGTGA TATTTCCGAT GTATCCCGGC CGTGTTATTC CCGGGAAAGT GGTCAGCACT
ATCGACATCG CCAGCGAAGG ACAATTGACG GCCACCGGGC TATTTCCGGG CATCGGCAGC
CCTGGCAATA CGCGGTTTGC CGTCCGTATC CGGCTCGACG ACGCAGAAGG TCGGAGATTG
CCGGCGGGCA TGCAAGGCGA CGCAGCGATC TACAGCGGCA GCGTTCAAAT CGCTGGCGTC
ATACGGATGG CGCTAATGCG AATGACCAGC TGGACGAACT ATCTCTACTT CACCTCTTGA
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| Protein sequence | MMMAIFGVYM LLIWLIFAKL KLIRLSLPIA LVLAAVGPAF AFFILLSMNN YHPSSSDARV
FQRIVQIVPH ITTPGRVAEI VAQPNAPLKK GDVIFRIDPQ PFQFEIDRLQ AALAAAQQNV
PQLKSSFDQA SAGVEKATAQ YNLAKADLQR QQDLFSKQVV AQAALDRAQR NAETAEQVVA
EASAAENRAR LAYQSNIGSD NTAVAQARQQ LAAATYNLDE SIVRAPCDGY AVNLQLVPGA
IVSAAASVLP FVCDRDQANL GMVVASFMQG PYLQIRPGEY AEVIFPMYPG RVIPGKVVST
IDIASEGQLT ATGLFPGIGS PGNTRFAVRI RLDDAEGRRL PAGMQGDAAI YSGSVQIAGV
IRMALMRMTS WTNYLYFTS
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