| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2505 |
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| Symbol | |
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| ID | 4022996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2800417 |
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| End bp | 2801472 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637962698 |
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| Product | lysine--tRNA ligase |
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| Protein accession | YP_569636 |
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| Protein GI | 91976977 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.418111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.522252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGGAG GTACTTTCGC GTCGCCATGG TGGGACCCGG CCAGGTATCT GGACCGGAAG
CCGTTTCTGC GCGCGCGCAG CGCGGTGACC CGGGCCGCGC GCGACTGGTT CGCCGCCGCT
GAGTTTGCCG AGGTCGAAAC CGCCATCCTG CAGCTTTCGC CGGGCAACGA GACACATTTG
CACGCGCCCC GCACCGAGTT CAAAGGACCC GACGGCGAAC TCCGGACGCG CTTTCTGCGG
ACCTCGCCGG AATTCGCCTG CAAGAAACTG CTCGCGGCCG GCGAGGAGCG GATCTTCGAG
TTCGCCCGGG TGTTTCGTGA CCGCGAGCGC GGCCGGCTAC ATCTGCCGGA GTTCACCATG
CTGGAATGGT ACCGCGCCGG CGAGGGCTAT CAGACGGTGA TCGCCGATTG CGCCGCGCTG
ATCGCGCTGG CGGCGCGAAC CACCGGCATC GGGCAGTTCT CGTTCCGTGG CCGGACCGCC
GACCCGCAGG CGGAGCCGGA GATGCTGACG GTCGCCGCCG CGTTCGCGCG CTTCGCCGGG
ATCGATCTGC TGGCGACCAT CATCGGCGGG GAAGGCGATC GCGATGCCCT GGCGCGCGCG
GCCGCCGCGA AGGTGCGTGT CGCGGACGAC GACAACTGGT CGGACATCTT CAGCAAGGTT
CTGGTCGACC ATATCGAGCC GCGGCTCGGC GAGGGGCGGC TGACGGTGCT GTGCGAATAT
CCCGCGCCGG AGGCGGCGCT GGCGCGCACC AAGGCGGACG ATCCGCGCGT GGCCGAACGC
TTCGAGGTCT ATGCCTGTGG CGTCGAACTC GCCAACGGCT TCGGCGAACT GACCGACGCC
GCCGAGCAGC GCCTGCGGTT CACGGCGTCG ATGGACGAGA AGGAGCGCCG CTACGGCGAG
CGCTATCCGC TCGATGAGGA TTTCCTCGCG GCGGTCGGTC GGATGCCCGA AGCGAGCGGC
GTCGCGCTCG GCTTCGACCG GCTGGTGATG TTGGCCGCGG GTGCGATGCG TATCGATCAG
GTGGTGTGGA CGCCGCCGGC AGACGAGGCT TCATGA
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| Protein sequence | MQGGTFASPW WDPARYLDRK PFLRARSAVT RAARDWFAAA EFAEVETAIL QLSPGNETHL
HAPRTEFKGP DGELRTRFLR TSPEFACKKL LAAGEERIFE FARVFRDRER GRLHLPEFTM
LEWYRAGEGY QTVIADCAAL IALAARTTGI GQFSFRGRTA DPQAEPEMLT VAAAFARFAG
IDLLATIIGG EGDRDALARA AAAKVRVADD DNWSDIFSKV LVDHIEPRLG EGRLTVLCEY
PAPEAALART KADDPRVAER FEVYACGVEL ANGFGELTDA AEQRLRFTAS MDEKERRYGE
RYPLDEDFLA AVGRMPEASG VALGFDRLVM LAAGAMRIDQ VVWTPPADEA S
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