| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2486 |
|---|
| Symbol | |
|---|
| ID | 4022977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2778753 |
|---|
| End bp | 2779745 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637962679 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_569617 |
|---|
| Protein GI | 91976958 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.25109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA CCCGACGTCA CGCCCTGACC GCTGCCGCCG GCGCGCTCGC CGCCGCACCG
CTGCTGCGAA GCGCCCCCGC GGAGGCTGCC GCGCCGGTCG CCGACAAGCA GGCTCCCAGC
TTCTATCGCT ACAAGGTCGG CGACGCCCAG GTGAACGCGA TCGCCGACGG CGCCAACACC
TTTCCGCTGG CCGACGGCTT CGTCGTCAAT GCCAAGAAGG ACGAGATCAA CGCCGCGCTC
GAGCAGGCCT TCATGCCGAA GGACAAGATG ACCATCAACT TCACGCCGCT GGCGATCAAC
ACCGGGGGCC GACTGGTGGT GGTCGACACC GGCAACGGCG AGGCTGCCTT CGCCTCCAGC
AAGGGCAATG TCGGGCAGTT CGCCGCCAAC ATGGCCGCGG CCGGCTTCGA CCCCAAGGCG
GTCGACATCG TGGTGATCTC GCACTTCCAC GGCGACCACA TCAACGGCCT GCTCACCGCC
GACAACCAGC CGATGTTCCC GAATGCCGAG GTGCTGGTGC CGGCCGCGGA GTGGAAATAC
TTCATGGACG AGGGCGAGAT GAGCCGCGCG TCCGGCGAAC GGCTGCAAAG CGTGTTCAAG
AATGCCCGCC GGGTGTTCGA GGCCGGGCTG AAGAAGAAGG TGACGCCCTA TGAGTGGGGC
AAGGACGTCG CGCCGGGCCT GCTGGCGGTG GAGGCAGCCG GCCACACGCC GGGCCACACC
TCGTTCGTGC TGTCGTCCGG CTCCGACAAG GTGTTCATCC AGTCCGACAT CACCAACCAT
CCGGCGCTGT TCGTCGCCAA TCCCGGCTGG CACCTGATGT TCGACCAGGA CCCGGCGCAG
GCCGAAGCCA CCCGCCGCAA GGTCTATGAC ATGCTGGTCG CCGAAAGGAT GCGGGTGCAG
GGCTTCCACT ACCCGTTCCC GGCCAACGGC TATGTGCAGA AAGACGGCAA CGGCTATCGG
CTGGTGCCGG CGCCGTGGAG TCCGGTGATC TGA
|
|---|
| Protein sequence | MDLTRRHALT AAAGALAAAP LLRSAPAEAA APVADKQAPS FYRYKVGDAQ VNAIADGANT
FPLADGFVVN AKKDEINAAL EQAFMPKDKM TINFTPLAIN TGGRLVVVDT GNGEAAFASS
KGNVGQFAAN MAAAGFDPKA VDIVVISHFH GDHINGLLTA DNQPMFPNAE VLVPAAEWKY
FMDEGEMSRA SGERLQSVFK NARRVFEAGL KKKVTPYEWG KDVAPGLLAV EAAGHTPGHT
SFVLSSGSDK VFIQSDITNH PALFVANPGW HLMFDQDPAQ AEATRRKVYD MLVAERMRVQ
GFHYPFPANG YVQKDGNGYR LVPAPWSPVI
|
|---|
| |