| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2482 |
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| Symbol | |
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| ID | 4022973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2772908 |
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| End bp | 2775094 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637962675 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_569613 |
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| Protein GI | 91976954 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.318128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA TGAAGGGTGT TACCATTCTG CTGTTGAGCG CTGCGACGGT CACGTCCGGT
GCGGGGTACG CCGGCAACGA AGGCAAGGGG GCCTATGAGC TCGGAATGAT CCAAGTGACT
GCGCCGGTGG ATGAAGGTTC CGAGTTCGGC GACTACGGCG GCAGCACGAT CTCCAACACG
CAGACCGAGA CCTACAACAA GCCGACGCTC GACAAGGCGA TCGACCTCGT GCCCGGCGTC
AATGCCGGCA ATACCGGCAG CCAGCGCAAC GAAACCAACA TCTACGTCCA CGGCTTCGAC
CGTCTGCAGG TGCCGCTGTC GATCGACGGC GTCCGCATCT ACCTTCCGGC AGACAATCGC
CTCGACTTCT CCCGCTTTCT GACCGACGAC ATCGCGCAGA TCCAGATCGC CAAGGGCTAC
GCATCCGTGC TCGACGGGCC GGGCGCTCTG GGCGGGGCGA TCAATCTGGT CTCCAAGAAG
CCGGTCAAGG CGCTGGAGGG CGAATGGCGC AGCCAGGCCG AATTCGGCAA CACCGGCGTG
TTCGACGGAT TCAAGAATTA CGGCCGCGTC GGCAGCAAGC AGGACCAATA CTACTTCCAG
GCCAGCGGCA CGTGGCGCAA GGTCGAGGGT TGGGAGCTGC CGTCGAGCTT CACGCCGACC
GCGGTCGAGG ACGGCGGTCG GCGCAACTTC TCGGACTCCA ACGATTGGAG CGTCAACCTG
AAGGCCGGCT GGACGCCAAA TCCGACCGAT GAGTACTCGA TCAATTTTAT CAAGCAGAAC
GGCAAGAAGA ACGCGCCGTA CAATGTCGAA CCGACGGCGT CGCCGAGATA CTGGTCGTGG
CCGTCTTGGA ATGTGCAGAT CTTGTCGGCG GCGACCAAGA CGGAGATCGG CGACGACGCC
TACGTCAAGA CGCGGACGTT CTGGGAGACC TTCGATAACG CGATCGACAT GTGGGACAAC
GCGGCGCAGA CGCAGCGATA CTCGACCAGC GCGGCGCGGT CGATCTATCA GGATTGGGCG
GTCGGCAATA CGGTCGAGGT CGGCAAGGAA TTCGGCAGCT TCGACACCCT CAAGGTGGCC
ACGCATGTGC GGCGTGACAG CCATTCCGAA TGGAACGAGC TGTTCACCGA CCGCTTCGGC
CTGAATGCGA CCACGACGCC GAAAAGCTCC TCCTGCAACA CCAGCGTCAC CTCGAGCGCG
GTCTGCTTCA ACGAGCCGAC CCAGACCTCC GTCGAAGACA CCTATTCGGT GGCGACGGAA
AACACGGTGC ACATCACGCC GAGCTTCGAC TGGGTGCAGG GCGCCAGCTA TGACTGGCGG
CATCTCAGCA AGGCCAACGA CTACGTGCTC GGACAGTACA GCAAGGGCGC CTATTACGAG
CCGTCCTGGA TCAACTACAA GTTGTTCGAC GATTCGGCCT TCAACTGGCA GTCGGCGGCG
ATCTGGCGTT ACTCGGACAC GGCGAAGCTG TTCATGAACA TCTCCGACCG CACCCGCTTT
CCGACATTGT TCGAACGCTA CAGCTCGCGC TTCGGTACGG GCGCGTCGAA CCCCCAATTG
CTTCCCGAAC GCGCGGTCAA TTATCAGCTT GGGTGGACCA ATGCCTTTGC TCCGAAAAGC
CAGGTGTCGG TGCTCGTCTA TTACGCCGAC GTCAGGGACA TGATTCAGTC GGTCGCGACC
GGCCGCACCT TCGTCGACCC GGTTTCCGGG AGGGCTTCCA CGATCACGCA GAACCAGAAT
GTCGGCAATG GCTATCGCTA TGGCATCGAT TTCGCGGTCG ACTATGCGGT GAGCGCCACG
CTCGTTCTGG GCGGAAACGC CTCCTACATC CACAACGTCC TGACCCACCC CACCGATCCG
ACGATCCAGC AGACCGGGAT TCCGACCGTC AAGGGAATGC TCTATGCGAG CTACAGCCCG
ATCGAATCGG TGACCCTGAC GCCGAACCTG TTGTTCGCCG ACGATCGCTG GTCGCAGAAG
AACCAAGTGA TCGCCCAGAA GTCGGTTTCC AGCTACGTCA AGACCGGCTC CTATATGCTG
GCCAATTTCG CGGCGGATTA CCGGATGCGG GAGAACCTCA CCTGGTCCGG CGGAGTGAGA
AACATCTTCG ATCAGGAATA CTCGCTCGCC TGGGGCTATC CCGAAGCCGG GCGAACCTAC
TACGTGTCGA TGAAGGCGAC ATTCTGA
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| Protein sequence | MKRMKGVTIL LLSAATVTSG AGYAGNEGKG AYELGMIQVT APVDEGSEFG DYGGSTISNT
QTETYNKPTL DKAIDLVPGV NAGNTGSQRN ETNIYVHGFD RLQVPLSIDG VRIYLPADNR
LDFSRFLTDD IAQIQIAKGY ASVLDGPGAL GGAINLVSKK PVKALEGEWR SQAEFGNTGV
FDGFKNYGRV GSKQDQYYFQ ASGTWRKVEG WELPSSFTPT AVEDGGRRNF SDSNDWSVNL
KAGWTPNPTD EYSINFIKQN GKKNAPYNVE PTASPRYWSW PSWNVQILSA ATKTEIGDDA
YVKTRTFWET FDNAIDMWDN AAQTQRYSTS AARSIYQDWA VGNTVEVGKE FGSFDTLKVA
THVRRDSHSE WNELFTDRFG LNATTTPKSS SCNTSVTSSA VCFNEPTQTS VEDTYSVATE
NTVHITPSFD WVQGASYDWR HLSKANDYVL GQYSKGAYYE PSWINYKLFD DSAFNWQSAA
IWRYSDTAKL FMNISDRTRF PTLFERYSSR FGTGASNPQL LPERAVNYQL GWTNAFAPKS
QVSVLVYYAD VRDMIQSVAT GRTFVDPVSG RASTITQNQN VGNGYRYGID FAVDYAVSAT
LVLGGNASYI HNVLTHPTDP TIQQTGIPTV KGMLYASYSP IESVTLTPNL LFADDRWSQK
NQVIAQKSVS SYVKTGSYML ANFAADYRMR ENLTWSGGVR NIFDQEYSLA WGYPEAGRTY
YVSMKATF
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