Gene RPD_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2481 
Symbol 
ID4022972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2771841 
End bp2772389 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content66% 
IMG OID637962674 
Producthypothetical protein 
Protein accessionYP_569612 
Protein GI91976953 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.35717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCGA GCTTGGCTGT GGCCGGCGCC GCGAACGGAT TGGACGACGA CATGAAAGCG 
GACAACCAAA TCAGAATGGG AGAAGTGGCG ACGGACTGGC GGGGCGGCAC AGACGCCAGC
CTGGTGTTCA TCGGCCGAAT CCACACGCCC TGGACGGACC TCGGCGCCTG CCCGCGCCGT
GGTCGCCCGG ACGGACCGCT CTGCCGGATC GAACTGTTCG AGACCTGGGT GCCGGCGCTG
GCCGGCATCA GCGACGACGC GCTGATCGAA GTGTTCTACT GGCTGCATCG CTCGCGGCGC
GATCTGCTGC TGCAGTGCCC CCGGGATGAC GGCGACGCAC GCGGCACGTT TTCGCTTCGC
TCACCTATTC GTCCCAACCC GATCGGAACG TCGGTCGTGC GCCTCGAAGG TCGCGACGGC
GCCAATCTTC TCGTCCGTGG CCTCGATTGC CTGGACGGCA CGCCCCTGGT GGATCTGAAG
CCCGATCGAT CGACCTTCAT CCCACAGGCG CCGGAGAAGC CCGGCGATTT CCACGTCGGA
GAGCAGTGA
 
Protein sequence
MLSSLAVAGA ANGLDDDMKA DNQIRMGEVA TDWRGGTDAS LVFIGRIHTP WTDLGACPRR 
GRPDGPLCRI ELFETWVPAL AGISDDALIE VFYWLHRSRR DLLLQCPRDD GDARGTFSLR
SPIRPNPIGT SVVRLEGRDG ANLLVRGLDC LDGTPLVDLK PDRSTFIPQA PEKPGDFHVG
EQ