| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2466 |
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| Symbol | |
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| ID | 4022957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2755528 |
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| End bp | 2757021 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637962659 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_569597 |
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| Protein GI | 91976938 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.246743 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.257462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCGA ACTGGCTCCG GGCGCTGTCG GCGATCGGCG CCGGCGCCAT TGTGCTGGCG
CTTGCGGCGC CCGCCGCGGC GGCCAAGCGC GTCGCGCTGG TGATCGGCAA CAATGATTAT
CGCAACGTGC CGAAGCTGCA GAAGGCGGTG AACGACGCCC GCACCATGGG CGACGCGCTC
CGCACGCTCG GATTCCAGGT GATGGCCGCG GAGAACCAGA GCCGCATCGG CTTCAGCCAG
AGCCTGCTGG CGTTCGACAA CGCGATCGAG CCCGGCGACA CCGCGTTCTT CTTCTATGCC
GGGCATGGCT TCGAGATTTC CGGCCAGAAC TTCCTGCTGC CGACCGACGT GCCGGCGGCG
ACCGAAGGCC AGGAAGAACT GTTGCGCGAC GCCTCGATCC TCGCCGACCG CATCGTCGAG
CGGCTGCAGA ACCGCGGCGC GCGCACCGCG ATCCTGGTGC TCGACGCCTG CCGCAACAAC
CCGTTCGAGC GCCGCGGCAC CCGCGCGCTC GCCGGCCGCG GCGGGCTCGC GCCGATGACG
ACGCTGCCCG AGGGCGTGTT CTCGATCTTC TCGGCGGGGC CGCGGCAGAC CGCGCTGGAT
CGCTTGTCGG ACACCGACGC CAATCCGAAC TCGGTGTTCA CGCGGGTGTT CGCCAAGCAG
TTGCTCGATC CCGGCGACAA TCTCGTGCAG GTGGCGCAGC GGACGCGGCG CACGGTGAGC
GAAATGGCCG AGACTGTCGG TCACAAGCAG GTGCCGGTGT ATTTCGACCA GATGGTCGAC
GACGTGTTTC TGAGCGGCGC GCCGAAGCCG GGCGCGGCTG CGCCGGCGGA GTCGCCGCAG
AAGGTCGCGG CGCTGCCGCC GGTGGCGCCG TTGAAGCCGC CGACCTCGGA GAGCCTCAAC
GCGCCGATCG CCAGCTTCTC GCGCCACAAT GGCGGCTGGA CGGTGTCGTT CTCGATCGCC
GATCCGACCC TCGGGATCTC CTGGCGGCTC GGCGACAGCG GAGAATTCCG CGAGACGGGT
TTCATGGACG TGCTCGATCC GCGCACCCGC AAGCGGATGC CGAACCCTTC GATCCAGTTG
CCGACAGACG CGGCGGCCGC GACCCTCGAG GTGCGCTATG TCGATGCGCA GGGCGAGCTG
CAGGGGCCGT TTCCGATCCG CTTCGAGCCG GAGGCCGCGC TGCTGCGCGA CCAGCGCAAG
ATACTTGACA TGACCGCGAC GAGCTGGCTG TCGTTCCGCG AGTTCAATGG GCTACTGGTC
TACTACACAC ATCTGATGTC TTATCGTTGC GCGATCCGCG AGGCGCGGAT CGGGATCGAC
AGCGCGGTTC CCGACAAGGT GCTGAAAATG CCGGCCTGCG ACCTACGCGA TCCCGTCGCG
ATCCCGCACG AGGCGACGCC GTATCTGAAG CTGTCGCCGA ACGTGAAATC GGTGTCGGTG
GAATTGACCT ATCGCGACGG CTCGGTGTCG GAGATCAAGA GCTTTCGGCG TTGA
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| Protein sequence | MRSNWLRALS AIGAGAIVLA LAAPAAAAKR VALVIGNNDY RNVPKLQKAV NDARTMGDAL
RTLGFQVMAA ENQSRIGFSQ SLLAFDNAIE PGDTAFFFYA GHGFEISGQN FLLPTDVPAA
TEGQEELLRD ASILADRIVE RLQNRGARTA ILVLDACRNN PFERRGTRAL AGRGGLAPMT
TLPEGVFSIF SAGPRQTALD RLSDTDANPN SVFTRVFAKQ LLDPGDNLVQ VAQRTRRTVS
EMAETVGHKQ VPVYFDQMVD DVFLSGAPKP GAAAPAESPQ KVAALPPVAP LKPPTSESLN
APIASFSRHN GGWTVSFSIA DPTLGISWRL GDSGEFRETG FMDVLDPRTR KRMPNPSIQL
PTDAAAATLE VRYVDAQGEL QGPFPIRFEP EAALLRDQRK ILDMTATSWL SFREFNGLLV
YYTHLMSYRC AIREARIGID SAVPDKVLKM PACDLRDPVA IPHEATPYLK LSPNVKSVSV
ELTYRDGSVS EIKSFRR
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