Gene RPD_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2456 
Symbol 
ID4022947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2743386 
End bp2744867 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content60% 
IMG OID637962649 
Productcysteine desulfurase activator complex subunit SufB 
Protein accessionYP_569587 
Protein GI91976928 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCG TACAAGAAAC CGTCGATCGG GTTCGCCAGA TCGACGTCGA TCAATATCGC 
TATGGATTCG AGACGCTGAT CGAGTCCGAC AAGGCTCCCA AGGGGCTGTC GGAAGACATC
GTCCGATTTA TCTCCGCAAA AAAGAACGAA CCGGACTGGA TGCTGCAGTG GCGGCTTGAA
GCCTATCGCC GCTGGCTGAC CATGACGGAG CCCACCTGGG CGCGGGTGAA CTACCCCAAG
ATCGACTTCC AGGACCTGTA TTATTATTCG GCCCCCAAGC CGAAGAAGAC CATCGGTTCG
CTGGACGAAA TCGATCCGGA GATTCTCGAG ACCTACAAGA AGCTCGGCAT TCCGCTGCGT
GAAGTCGAAG TGCTCGAAGG CGTGGTTCGT CCCGAGGGCG AACGGCGCAT CGCAGTCGAT
GCGGTGTTCG ACTCGGTGTC GGTGGCGACC ACCTTCCAGG CCGAGTTGAA GAAGGCCGGC
GTGATCTTCA TGCCGATCTC GGAAGCGATC AAGCAGCACC CCGAATTGGT GCAGAAATAT
CTCGGCACCG TGGTGCCGAC GACTGACAAT TACTATGCGA CGCTGAACTC CGCGGTGTTC
TCCGACGGCT CGTTCGTCTA TGTGCCGCCG GGCGTGCGCT GCCCGATGGA GCTGTCGACC
TATTTCCGCA TCAACGAGCG CAACACCGGC CAGTTCGAGC GTACGCTGAT CATCGCCGAC
AAGGGCTCCT ACGTCAGCTA TCTCGAAGGC TGCACCGCTC CGCAGCGCGA CGAGAATCAG
CTTCACGCCG CGGTCGTCGA GCTGGTCACG CACGACGACG CCGAAATCAA ATATTCGACG
GTGCAGAACT GGTACCCCGG AAATTCCGAG GGCAAGGGCG GCATCTACAA TTTCGTCACC
AAGCGCGGTG ACTGCCGCGG CGCCAACTCG AAGATTTCCT GGACTCAGGT CGAGACCGGT
TCGGCGATCA CCTGGAAATA TCCGAGCTGC ATTTTGCGCG GCGATAACTC CCGCGGAGAA
TTCTACTCGA TCGCGATCTC GAACGGCTAT CAGCAGGTCG ATAGCGGCAC CAAGATGATC
CATCTCGGCA ACAACACCAC CAGCCGGATC ATCTCCAAGG GCATCGCGGC CGGCCGATCG
CAGAACACCT ATCGCGGTCT CGTCACCGCG CACCGCAAGG CCAAGGGCGC GCGTAACTTC
ACCGCCTGCG ACTCGCTGCT GATCGGCGAC CAGTGCGGCG CGCATACCGT GCCCTATATC
GAGGCGAAGA ACACGTCGGC GCTGTTCGAG CACGAAGCCA CCACGTCGAA GATCTCCGAG
GACGTGCTGT TCTATTGCGT CCAGCGAGGC CTCAGCCAGG AAGAGGCGGT CGGCCTCGTG
GTCAACGGCT TCGTCAAGGA CGTGCTGCAG CAACTGCCGA TGGAATTCGC GGTGGAAGCG
CAGAAGCTGA TCTCGATCTC GCTCGAAGGC TCGGTCGGCT AA
 
Protein sequence
MAAVQETVDR VRQIDVDQYR YGFETLIESD KAPKGLSEDI VRFISAKKNE PDWMLQWRLE 
AYRRWLTMTE PTWARVNYPK IDFQDLYYYS APKPKKTIGS LDEIDPEILE TYKKLGIPLR
EVEVLEGVVR PEGERRIAVD AVFDSVSVAT TFQAELKKAG VIFMPISEAI KQHPELVQKY
LGTVVPTTDN YYATLNSAVF SDGSFVYVPP GVRCPMELST YFRINERNTG QFERTLIIAD
KGSYVSYLEG CTAPQRDENQ LHAAVVELVT HDDAEIKYST VQNWYPGNSE GKGGIYNFVT
KRGDCRGANS KISWTQVETG SAITWKYPSC ILRGDNSRGE FYSIAISNGY QQVDSGTKMI
HLGNNTTSRI ISKGIAAGRS QNTYRGLVTA HRKAKGARNF TACDSLLIGD QCGAHTVPYI
EAKNTSALFE HEATTSKISE DVLFYCVQRG LSQEEAVGLV VNGFVKDVLQ QLPMEFAVEA
QKLISISLEG SVG