Gene RPD_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2454 
Symbol 
ID4022945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2741245 
End bp2741892 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID637962647 
Producthypothetical protein 
Protein accessionYP_569585 
Protein GI91976926 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG TCATTTTCAC CGGTCCCGCA GGCCGCCTCG AAGGCCGCTA CCATCCCGCG 
AAACAGAAGA ACGCGCCGAT CGCGATGGTG TTGCACCCGC ATCCGCAGTT CCGCGGCAGC
ATGAACCACC CGATCGTCTA TCAGGTTTAT TACGCCTTCG TGGCGCGTGG TTTTTCGGTG
CTGCGCTTCA ATTTCCGCGG CGTCGGCCGC AGCCAGGGTT CGTTCGATCA CGGCACCGGC
GAATTGTCCG ACGCGGCGTC GGCGCTCGAC TGGGCGCAGA CCATCAACCC CGAAGCGCGC
GCCTGCTGGG TCGCCGGTTT CTCGTTCGGG GCCTGGATCG GCATGCAGCT CTTGATGCGA
CGGCCCGAGG TCGAGGGCTT CATCTCGATC GCGCCGGAGC CGAACCGCTA TGACTTCTCG
TTCCTCGCGC CCTGTCCGTC GTCCGGCCTG ATCGTGCACG GCGAAAAGGA CATCGTCGCG
CCCGCCAAGG ACGTCAACAC GTTGGTCGAA AAGCTGAAGA CCCAGAAGGG CATCATCATC
GACCAGCAGA CCATCCCCGG CGCCAACCAT TTCTTCGAAG ACAAGATGGA GCCGTTGATG
GAGACGGTGA CGTCCTATCT CGACATGCGG CTGGCCAACG TCCGCTGA
 
Protein sequence
MPEVIFTGPA GRLEGRYHPA KQKNAPIAMV LHPHPQFRGS MNHPIVYQVY YAFVARGFSV 
LRFNFRGVGR SQGSFDHGTG ELSDAASALD WAQTINPEAR ACWVAGFSFG AWIGMQLLMR
RPEVEGFISI APEPNRYDFS FLAPCPSSGL IVHGEKDIVA PAKDVNTLVE KLKTQKGIII
DQQTIPGANH FFEDKMEPLM ETVTSYLDMR LANVR