Gene RPD_2452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2452 
Symbol 
ID4022943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2738631 
End bp2739887 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content64% 
IMG OID637962645 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_569583 
Protein GI91976924 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT TTAAGTCTGA TTTTATGAAT GTGCTCCAGC AGCGGGGCTT CATCCATCAG 
ATTTCCGACC CCGAGTCGCT GGACGCGCTG GCGTCGCGCC GCGAGGTCGT CGCTTATGTC
GGTTACGACT GCACCGCGTC GTCGCTGCAT GTCGGTCATC TGCTGTCGAT CATGATGCTG
CACTGGCTGC AGGCGACCGG CAACAAGCCG GTCGCACTGA TGGGCGGCGG CACCACCCGC
GTCGGCGACC CTTCCGGCCG CGACGAGACC CGCAAGATCC TCAGCTTGGA GCAGATCGAA
GCCAACAAGG ACTCGATCAA GCGGGTGTTC GCCAATTTCA TCACCTTCGG CGACGGCGGC
AACAAGGCGC TGATGGTCGA CAACGCCGAT TGGCTGACCA AGCTCAACTA CATCGAGATG
CTGCGCGACC TCGGCCGCCA CTTCTCGGTC AACCGCATGT TGACGATGGA CTCGGTGAGG
ATGCGCCTCG AGCGCGAGCA GGAGCTGTCG TTCATCGAAT TCAACTACAT GATCCTGCAG
TCCTACGATT ACGTCGAACT GTCGCGGCGC CACGGCTGCA ATCTGCAGAT GGGCGGCTCC
GATCAGTGGG GCAACATCGT CACCGGCGTC GACCTCGGTC GCCGCATGGG CACGCAGCAG
CTCCACGCCC TCACCTGTCC GCTGCTGACG ACTTCTTCCG GCGCCAAGAT GGGCAAGACC
GCGGCCGGCG CGGTCTGGCT GAACGGCGAC ATGCTGCCGG CCTATGACTA CTGGCAGTAC
TGGCGCAACA CCGAGGACGC CGACGTCGGC CGTTTCCTCA AGCTGTTCAC GCTGCTTCCG
ATCGACGATA TCGAGCGGTT GTCCAAGCTG CAGGGCGCCG AGATCAACGA GGCGAAGAAG
ATCCTGGCCA CCGAAGCGAC CGCGCTGGTG CACGGCCGCG ACGCCGCCGA CAAGGCCGAG
GCGACCGCGC GAACCACCTT CGAACAGGGC GGCACTGCGC AGGATCTGCC GAGCGTCGAC
GTCGCGCGGG CGGAGCTCGA TGCCGGCCTC AGCGTGCTGG CGGCGTTCGC GGAGAAATCC
GGGCTCGTCG CCTCGAACGG CGAAGCGCGG CGGCAGATCA AGGCCGGCGG GCTGAAGGTC
AACGACGTTC CGGTCACCGA CGAGAAGATG GCGCTGACCG CGGCGGATCT GACTGCCGAC
GGCGTAATCA AGCTGTCGAT GGGCAAGAAG AAGCACGTGC TACTGCGGCC TGCATAG
 
Protein sequence
MTAFKSDFMN VLQQRGFIHQ ISDPESLDAL ASRREVVAYV GYDCTASSLH VGHLLSIMML 
HWLQATGNKP VALMGGGTTR VGDPSGRDET RKILSLEQIE ANKDSIKRVF ANFITFGDGG
NKALMVDNAD WLTKLNYIEM LRDLGRHFSV NRMLTMDSVR MRLEREQELS FIEFNYMILQ
SYDYVELSRR HGCNLQMGGS DQWGNIVTGV DLGRRMGTQQ LHALTCPLLT TSSGAKMGKT
AAGAVWLNGD MLPAYDYWQY WRNTEDADVG RFLKLFTLLP IDDIERLSKL QGAEINEAKK
ILATEATALV HGRDAADKAE ATARTTFEQG GTAQDLPSVD VARAELDAGL SVLAAFAEKS
GLVASNGEAR RQIKAGGLKV NDVPVTDEKM ALTAADLTAD GVIKLSMGKK KHVLLRPA