| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2439 |
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| Symbol | |
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| ID | 4022930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2716058 |
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| End bp | 2717485 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962632 |
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| Product | peptidase M48, Ste24p |
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| Protein accession | YP_569570 |
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| Protein GI | 91976911 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.496916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAG TGATGGTTGA AGACCTGCCC GGCCGCTTGC GCCGGATCGC CCGCGTGATG
GTGATGCGGC TGGTGGCGAT CGTGATCGCC GCAGCGCTGG CGCTCGCCCC GGTCCCGAGC
CTCGCGCAGG CGCCGCAGCA GAAGGGCCCG CCGCTGCTGC GCGACACCGA GATCGAGAAT
CTGCTGCGTG ACTATACCCG GCCGATCCTG CGCGCCGCGG GCCTCGAAAA GCAGAATATC
CAGATCGCCA TCATCAACGA TCCGAATTTC AACGCCTTTG TCGCCGATGG CCGCCGCATC
TTCGTCAACT ACGGCGCGCT GATGCAGTCG CAGACGCCGA ACCAGCTGAT CGGCGTGCTG
GCGCACGAGA CCGGCCACCT CGCCGGCGGC CATTTGTCCA AACTCCGGAC CCAGCTTGCG
CAGGCGCAGA CGCAGATGAT CGTCGCGATG CTGCTCGGCG TCGGCGCGAT GGTCGCGGGC
TCCCAGGCCG GTCCGAACAG CGGCGCCGCC AATATCGGCG CGGCCGCGAT CTCGGCTCCG
CAAGAGCTGA TCCGGCGCAA TCTGCTGTCC TATCAGCGTC AGCAGGAAGA GAACGCCGAC
CGCGCCGCGG TGAAATTCCT CGACGCCACC GGCCAATCGG CGAAGGGCAT GTACGAGACC
TTCCGGCGCT TCACCGACGA GAGCCTGTTC GCTGCGCGAG GTGCCGACCC TTACGCGCAG
TCGCATCCGA TGCCGGCCGA ACGCGTCCGC GCACTCGAGG AGCTGGCCCG TTCAAGTCCG
AATTGGGACA AGAAGGACGA CGCCGCGCTG CAGCTTCGCC ACGACATGAT GCGGGCGAAG
ACCTCCGGCT TCATGGAGCG GCCCGACACC GTGTACCGGC GCTATCCGCT GTCCAACACC
AGCCTGCCCG CGCGCTATGC CCGCGCGATC TCCACCTATC TTCGCGGCGA TCCGCGATCG
GCGTTGGCGC AGATCGATAG CCTGATCCAG GCCGAACCGA ACAATCCCTA TTTTTACGAA
TTGCGCGGCC AGGCGCTGCT CGAGGGCGGC CGGCCGCAGG AAGCCATCGC GCCGCTGCGC
AAGGCGTTGT CGCTGACGCG CGGCGCGCCG CTGATCGAGA TGCTGCTCGG CCAAGCGCTG
GTGGCCAGCA ACAACAACGC CACTACCGAA GAAGCGATCC GGATTCTGCG CGCCGCGTTG
TCGCGCGAGG GCGAGGCGCC GCTCGGCTAC AGCCAGCTCG CGATGGCCTA TGGCCGCAAG
GGCGACTACG CAGAAGCCGA TCTCGCCTCG GCGCAGGCGG CCTTCCTGCG CGGCGACAAC
AAGACCGCGC GCGAACTCGC ATCACGCGCC AAAACCCGTT TTCCGGTCGG CTCGCCGGGC
TGGGTGAAGG CCGACGATAT CGTCGCAGCG AAGCCGCCGG CCAAATAA
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| Protein sequence | MPKVMVEDLP GRLRRIARVM VMRLVAIVIA AALALAPVPS LAQAPQQKGP PLLRDTEIEN
LLRDYTRPIL RAAGLEKQNI QIAIINDPNF NAFVADGRRI FVNYGALMQS QTPNQLIGVL
AHETGHLAGG HLSKLRTQLA QAQTQMIVAM LLGVGAMVAG SQAGPNSGAA NIGAAAISAP
QELIRRNLLS YQRQQEENAD RAAVKFLDAT GQSAKGMYET FRRFTDESLF AARGADPYAQ
SHPMPAERVR ALEELARSSP NWDKKDDAAL QLRHDMMRAK TSGFMERPDT VYRRYPLSNT
SLPARYARAI STYLRGDPRS ALAQIDSLIQ AEPNNPYFYE LRGQALLEGG RPQEAIAPLR
KALSLTRGAP LIEMLLGQAL VASNNNATTE EAIRILRAAL SREGEAPLGY SQLAMAYGRK
GDYAEADLAS AQAAFLRGDN KTARELASRA KTRFPVGSPG WVKADDIVAA KPPAK
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