Gene RPD_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2418 
Symbol 
ID4022909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2696737 
End bp2697159 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID637962611 
ProductNADH dehydrogenase 
Protein accessionYP_569549 
Protein GI91976890 
COG category[C] Energy production and conversion 
COG ID[COG3761] NADH:ubiquinone oxidoreductase 17.2 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.211184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0219307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCGC CCATGAAACT GTTTCTGCTA CGGATTTTCA CCTGGTGGTC GGGTTACACG 
TTCGGCACCC AATTATGGAC ATGGCGGTTC GGCGAGCTTG TCGGCACCGA CGAGACCGGA
AACCGCTATT TCCGGACCAA GGGCGGCAAG ATTGATCCGA CGCTCGGCTT CGAGCGGCGC
TGGGTGCTCT ACAACGGCTA TGCCGAAGCG ACGCGAGTTC CGCCCGACTG GCACGGCTGG
CTGCACCACA TCGTCGACGT GCCGCCGACC GAGGAAAACT ATCAGCCGCG CGAATGGCAA
AAGCCGCATC AACCGAATTT GACGGGCACG CCTCTGGCGT ATCGTCCGGC GGGCTCGACT
CTGTCTGTCG GCCGCAGGCC CAAGGCGACC GGCGACTATC AGCCCTGGAC TCCAGGAAGC
TGA
 
Protein sequence
MDAPMKLFLL RIFTWWSGYT FGTQLWTWRF GELVGTDETG NRYFRTKGGK IDPTLGFERR 
WVLYNGYAEA TRVPPDWHGW LHHIVDVPPT EENYQPREWQ KPHQPNLTGT PLAYRPAGST
LSVGRRPKAT GDYQPWTPGS