Gene RPD_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2416 
Symbol 
ID4022907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2694869 
End bp2695768 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content67% 
IMG OID637962609 
Producthypothetical protein 
Protein accessionYP_569547 
Protein GI91976888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0994864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0254261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGT TTCACGATGC GGCTGCGCGC GGCCGGATTT CGCCGCTCGG GCTGTTTTTT 
CTCGGCGTCG CGTCGATCGG CTGGGGCCTG AACTTCCCGA TCATGAAGAA CCTGATGACG
GAATGGCCGC CGCTGTCGGC GCGCGGGTTG TCCGGGATCA TCGGCGCGCT GGCACTGGCG
CTGATCGCGA CATCGCGCGG AGAGACACTC AGGGTGCCGC GCGCGATGTG GTCGCGACTG
ATCCTGGTGT CGATGCTGAC GATCGGCGGC TGGGTGGCTT TCATGGGGCT GGCGTTGTTG
TGGCTGCGTG CGAGTGACGC GGCCGTGCTC GGCATTTCCA TCCCGCTCTG GGTGGCATTG
GTGGCGTGGC CTGTGCTGGG CGAGCGGGTG TCGCCGGTGC GCGCGATCGC GCTGCTGATC
GCGCTCGCCG GGATCGCTGT GCTGATCGGC GGCAGCGGCT TCGACGCCAG CCTCGACAAG
TTGCCGGGCA TTCTCTGCGC CTTGGCGGGC GCGGTCTGCG TCGCGTTCGG CACGGTGTTG
ACCAAGCACT TTCCGCTGGC GTTGCCGCCG CTGTCGCTTG CCACGTGGCA GATCGGACTC
GGCTGCATTC CGGTTGCGGT GGCGGGACTG GCGTTCGAGG ATCCGCATGT CGCAGCTTTG
TCGGCGATCG GTTGGGCGTC GATGATCTAT ATGACGCTGG TGCAGTTCTG CGTCTGCTAC
GTCTGCTGGT TCGCCGCACT CGAGCGCTTG CCCGCCGCGA CAGCGTCGAT CGGCACGCTG
CTGGTGCCGG TGGTCGGCGT GCTGGCCTCG GCAGCGATGT TACAGGAACC GTTAGGGCTG
ACCGAAGTGA TCGCGCTGAC GGTGACGCTG GCGAGCGTGG CATTGGCATT GCGGTCCTGA
 
Protein sequence
MTTFHDAAAR GRISPLGLFF LGVASIGWGL NFPIMKNLMT EWPPLSARGL SGIIGALALA 
LIATSRGETL RVPRAMWSRL ILVSMLTIGG WVAFMGLALL WLRASDAAVL GISIPLWVAL
VAWPVLGERV SPVRAIALLI ALAGIAVLIG GSGFDASLDK LPGILCALAG AVCVAFGTVL
TKHFPLALPP LSLATWQIGL GCIPVAVAGL AFEDPHVAAL SAIGWASMIY MTLVQFCVCY
VCWFAALERL PAATASIGTL LVPVVGVLAS AAMLQEPLGL TEVIALTVTL ASVALALRS