Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2416 |
Symbol | |
ID | 4022907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2694869 |
End bp | 2695768 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637962609 |
Product | hypothetical protein |
Protein accession | YP_569547 |
Protein GI | 91976888 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0994864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0254261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGACGT TTCACGATGC GGCTGCGCGC GGCCGGATTT CGCCGCTCGG GCTGTTTTTT CTCGGCGTCG CGTCGATCGG CTGGGGCCTG AACTTCCCGA TCATGAAGAA CCTGATGACG GAATGGCCGC CGCTGTCGGC GCGCGGGTTG TCCGGGATCA TCGGCGCGCT GGCACTGGCG CTGATCGCGA CATCGCGCGG AGAGACACTC AGGGTGCCGC GCGCGATGTG GTCGCGACTG ATCCTGGTGT CGATGCTGAC GATCGGCGGC TGGGTGGCTT TCATGGGGCT GGCGTTGTTG TGGCTGCGTG CGAGTGACGC GGCCGTGCTC GGCATTTCCA TCCCGCTCTG GGTGGCATTG GTGGCGTGGC CTGTGCTGGG CGAGCGGGTG TCGCCGGTGC GCGCGATCGC GCTGCTGATC GCGCTCGCCG GGATCGCTGT GCTGATCGGC GGCAGCGGCT TCGACGCCAG CCTCGACAAG TTGCCGGGCA TTCTCTGCGC CTTGGCGGGC GCGGTCTGCG TCGCGTTCGG CACGGTGTTG ACCAAGCACT TTCCGCTGGC GTTGCCGCCG CTGTCGCTTG CCACGTGGCA GATCGGACTC GGCTGCATTC CGGTTGCGGT GGCGGGACTG GCGTTCGAGG ATCCGCATGT CGCAGCTTTG TCGGCGATCG GTTGGGCGTC GATGATCTAT ATGACGCTGG TGCAGTTCTG CGTCTGCTAC GTCTGCTGGT TCGCCGCACT CGAGCGCTTG CCCGCCGCGA CAGCGTCGAT CGGCACGCTG CTGGTGCCGG TGGTCGGCGT GCTGGCCTCG GCAGCGATGT TACAGGAACC GTTAGGGCTG ACCGAAGTGA TCGCGCTGAC GGTGACGCTG GCGAGCGTGG CATTGGCATT GCGGTCCTGA
|
Protein sequence | MTTFHDAAAR GRISPLGLFF LGVASIGWGL NFPIMKNLMT EWPPLSARGL SGIIGALALA LIATSRGETL RVPRAMWSRL ILVSMLTIGG WVAFMGLALL WLRASDAAVL GISIPLWVAL VAWPVLGERV SPVRAIALLI ALAGIAVLIG GSGFDASLDK LPGILCALAG AVCVAFGTVL TKHFPLALPP LSLATWQIGL GCIPVAVAGL AFEDPHVAAL SAIGWASMIY MTLVQFCVCY VCWFAALERL PAATASIGTL LVPVVGVLAS AAMLQEPLGL TEVIALTVTL ASVALALRS
|
| |