Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2384 |
Symbol | |
ID | 4022873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2662843 |
End bp | 2663457 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637962576 |
Product | 4-hydroxybenzoyl-CoA thioesterase |
Protein accession | YP_569516 |
Protein GI | 91976857 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family [TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.29549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.378744 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAT CATGGCCCGG CAGGAAAACG CCACGCTTTC GGATGTTCGA AGGAGCACAT GGTATCGATT TGCCGAAGCG AAGGGCCTTG GCAATCGCCG AACCGTCCCA TGCTCAACTC GACGGCGAGA TCTGCGATGG CATCCATCGC ATGCTCGTCC GGGTCTACTA CGAAGACACC GATTTCTCCG GAATCGTCTA CCACGCCAAC TATCTCCGCT TTCTGGAAAG AGGTCGCAGC AACTATCTTC GATTGCTCGG CGCCGACCAG CGAGCGCTGT TCGCAGACGG CAGCGGCGCA CCAGGATACG CGTTCGTCGT TCGTGCCATG CAACTTGAGT TTCTCAAGTC GGCAAGGATG GACGACGTGC TTGAGGTCGT CACGACGCCG CTCGAGGTCA AGGGCGCTTC GATCACGATG GGGCAGCAAA TCCTTCGCGG CGGGATCGTC CTGTGCGACG CCAAGCTCAA GATCGCCTTC GTCACGGGCG GGCGGGTGCG CCCGATTCCG AGAAACATCC GGGCCGCGAT GGCCACCGGT CGTGTCGTCC CTAGCTCTCC GTTTTCAATC GCCATCGTGC CGACATCAGA TTCGGACGGA AAGCCATCAT GCTGA
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Protein sequence | MNASWPGRKT PRFRMFEGAH GIDLPKRRAL AIAEPSHAQL DGEICDGIHR MLVRVYYEDT DFSGIVYHAN YLRFLERGRS NYLRLLGADQ RALFADGSGA PGYAFVVRAM QLEFLKSARM DDVLEVVTTP LEVKGASITM GQQILRGGIV LCDAKLKIAF VTGGRVRPIP RNIRAAMATG RVVPSSPFSI AIVPTSDSDG KPSC
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