Gene RPD_2384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2384 
Symbol 
ID4022873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2662843 
End bp2663457 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content60% 
IMG OID637962576 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_569516 
Protein GI91976857 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.29549 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.378744 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT CATGGCCCGG CAGGAAAACG CCACGCTTTC GGATGTTCGA AGGAGCACAT 
GGTATCGATT TGCCGAAGCG AAGGGCCTTG GCAATCGCCG AACCGTCCCA TGCTCAACTC
GACGGCGAGA TCTGCGATGG CATCCATCGC ATGCTCGTCC GGGTCTACTA CGAAGACACC
GATTTCTCCG GAATCGTCTA CCACGCCAAC TATCTCCGCT TTCTGGAAAG AGGTCGCAGC
AACTATCTTC GATTGCTCGG CGCCGACCAG CGAGCGCTGT TCGCAGACGG CAGCGGCGCA
CCAGGATACG CGTTCGTCGT TCGTGCCATG CAACTTGAGT TTCTCAAGTC GGCAAGGATG
GACGACGTGC TTGAGGTCGT CACGACGCCG CTCGAGGTCA AGGGCGCTTC GATCACGATG
GGGCAGCAAA TCCTTCGCGG CGGGATCGTC CTGTGCGACG CCAAGCTCAA GATCGCCTTC
GTCACGGGCG GGCGGGTGCG CCCGATTCCG AGAAACATCC GGGCCGCGAT GGCCACCGGT
CGTGTCGTCC CTAGCTCTCC GTTTTCAATC GCCATCGTGC CGACATCAGA TTCGGACGGA
AAGCCATCAT GCTGA
 
Protein sequence
MNASWPGRKT PRFRMFEGAH GIDLPKRRAL AIAEPSHAQL DGEICDGIHR MLVRVYYEDT 
DFSGIVYHAN YLRFLERGRS NYLRLLGADQ RALFADGSGA PGYAFVVRAM QLEFLKSARM
DDVLEVVTTP LEVKGASITM GQQILRGGIV LCDAKLKIAF VTGGRVRPIP RNIRAAMATG
RVVPSSPFSI AIVPTSDSDG KPSC