Gene RPD_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2365 
Symbol 
ID4022854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2639107 
End bp2639814 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content65% 
IMG OID637962558 
ProductABC transporter related 
Protein accessionYP_569498 
Protein GI91976839 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.5119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGT GTAACGATCT CGTCGTCGCT CATGGCGACA TCCTGGCGTT GCAGGGCGTG 
ACGCTTAAAG TCGCTACCGG CGAGACCGTC GCGCTGATCG GCGCCAATGG CGCCGGGAAG
ACAACGCTGC TGCACACGAT CTCCGGCCTC AATCGCGCGT CGTCTGGCGA CATTCAACTC
GAGGGCGTGT CGATCTCGGA GTGGTCGACC GACCGGCGCG TCGCCAAGGG CATCTCGCAG
GCGCCGGAGG GGCGGCGCAT TTTCCCCGGT CTGACGGTCG AAGAGAATCT GTCACTGGCC
TCGGTGAGCT GGCGGCGTTG GGGCGAGTCC ATCGCGGCCG ATCTCGATCG TACGTTCGAG
CTGTTTCCTC GCCTCAAGGA GCGTCGCAAA CAGCTCGGCT GGTCGCTGTC CGGCGGCGAA
CAGCAGATGC TCGCGATCGG GCGCGCGCTG ATGGCGCGGC CGAAGCTTTT GTTGCTCGAC
GAGCCTTCGC TCGGTCTCGC GCCGCGGCTC GCCGAGGAGG TCTATGAGCG CGTCAAGCTG
ATCAGCGAGA GCGGTCTGAC CATTCTCGTC GTCGAACAGA ACACCGTCTT GGCGCTGTCG
GTCGCCGATC GCGCCTACGT GCTGGAAACC GGGCGCATCG TGCTCGAGGG GCCGGCCAGC
GAACTCAAGC ACAATGCGCG CGTGCGCGAA GCCTATCTGG GCCGTTGA
 
Protein sequence
MLTCNDLVVA HGDILALQGV TLKVATGETV ALIGANGAGK TTLLHTISGL NRASSGDIQL 
EGVSISEWST DRRVAKGISQ APEGRRIFPG LTVEENLSLA SVSWRRWGES IAADLDRTFE
LFPRLKERRK QLGWSLSGGE QQMLAIGRAL MARPKLLLLD EPSLGLAPRL AEEVYERVKL
ISESGLTILV VEQNTVLALS VADRAYVLET GRIVLEGPAS ELKHNARVRE AYLGR