Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2365 |
Symbol | |
ID | 4022854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2639107 |
End bp | 2639814 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962558 |
Product | ABC transporter related |
Protein accession | YP_569498 |
Protein GI | 91976839 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.5119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACGT GTAACGATCT CGTCGTCGCT CATGGCGACA TCCTGGCGTT GCAGGGCGTG ACGCTTAAAG TCGCTACCGG CGAGACCGTC GCGCTGATCG GCGCCAATGG CGCCGGGAAG ACAACGCTGC TGCACACGAT CTCCGGCCTC AATCGCGCGT CGTCTGGCGA CATTCAACTC GAGGGCGTGT CGATCTCGGA GTGGTCGACC GACCGGCGCG TCGCCAAGGG CATCTCGCAG GCGCCGGAGG GGCGGCGCAT TTTCCCCGGT CTGACGGTCG AAGAGAATCT GTCACTGGCC TCGGTGAGCT GGCGGCGTTG GGGCGAGTCC ATCGCGGCCG ATCTCGATCG TACGTTCGAG CTGTTTCCTC GCCTCAAGGA GCGTCGCAAA CAGCTCGGCT GGTCGCTGTC CGGCGGCGAA CAGCAGATGC TCGCGATCGG GCGCGCGCTG ATGGCGCGGC CGAAGCTTTT GTTGCTCGAC GAGCCTTCGC TCGGTCTCGC GCCGCGGCTC GCCGAGGAGG TCTATGAGCG CGTCAAGCTG ATCAGCGAGA GCGGTCTGAC CATTCTCGTC GTCGAACAGA ACACCGTCTT GGCGCTGTCG GTCGCCGATC GCGCCTACGT GCTGGAAACC GGGCGCATCG TGCTCGAGGG GCCGGCCAGC GAACTCAAGC ACAATGCGCG CGTGCGCGAA GCCTATCTGG GCCGTTGA
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Protein sequence | MLTCNDLVVA HGDILALQGV TLKVATGETV ALIGANGAGK TTLLHTISGL NRASSGDIQL EGVSISEWST DRRVAKGISQ APEGRRIFPG LTVEENLSLA SVSWRRWGES IAADLDRTFE LFPRLKERRK QLGWSLSGGE QQMLAIGRAL MARPKLLLLD EPSLGLAPRL AEEVYERVKL ISESGLTILV VEQNTVLALS VADRAYVLET GRIVLEGPAS ELKHNARVRE AYLGR
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