Gene RPD_2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2364 
Symbol 
ID4022853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2638383 
End bp2639120 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content65% 
IMG OID637962557 
ProductABC transporter related 
Protein accessionYP_569497 
Protein GI91976838 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.106174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC TGGAAGCGCG CAATATTCAC AAGCGCTATG GCGGTCTCGC GGCATTGACG 
GATGTCGATC TGACCGTGGC GAAGGGACAG TTCGTCGCCG TGATCGGGCC GAACGGCGCC
GGCAAATCGA CGCTGTTGAA TGTGCTGACC GGTCTTGCGA TGCCCGACGA AGGGCAGGTC
GTGCTGGGCG GCCGGGCCAT CACACGAATG GCCACCAACC GGCGCATCCG TGCCGGCCTA
GGCCGCACCT TCCAGCACGG CCGGGTATTT CCACGGCTGA ACGTGCTGGA GAACGTCATG
ACCGGCGCCG CTATCCGCGG CGATCTCAGC GAAGCCGCGC TGCGCGAGGT TTCGATGGAA
GTGATCGCCC AGATGGGCCT CGCCGAGGAC GCGAATGAGG CGATCGGTTC GCTGTCTTAT
GGCCGCCGCC GCATGGTGGA GCTGGCGCGG GCGCTGGCCT GCCGGCCGCA GGTCCTGCTG
TTGGACGAGC CGGCCGCAGG TCTGAATTCC GGAGAGGTCG ATCAACTGGT CGACCGGCTG
ACGGAGCTAC GTGCCAGGCA CGGGCTCGCC ATCGTGCTGA TCGAGCACAA TATGGGCATG
GTCATGCGCC TCGCCGAGCG GATCGTCGTG CTCAATTTCG GCTGCAAGAT CGCGGAAGGC
ACGCCGGCGG AGATCCAGGC CGATCCTGCC GTGCTGTCGG CCTATCTTGG CGAAGGTTAT
GTCCATGCTG ACGTGTAA
 
Protein sequence
MTVLEARNIH KRYGGLAALT DVDLTVAKGQ FVAVIGPNGA GKSTLLNVLT GLAMPDEGQV 
VLGGRAITRM ATNRRIRAGL GRTFQHGRVF PRLNVLENVM TGAAIRGDLS EAALREVSME
VIAQMGLAED ANEAIGSLSY GRRRMVELAR ALACRPQVLL LDEPAAGLNS GEVDQLVDRL
TELRARHGLA IVLIEHNMGM VMRLAERIVV LNFGCKIAEG TPAEIQADPA VLSAYLGEGY
VHADV