Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2362 |
Symbol | |
ID | 4022851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2636529 |
End bp | 2637404 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637962555 |
Product | inner-membrane translocator |
Protein accession | YP_569495 |
Protein GI | 91976836 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.016238 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGACT TCGTCCAGCT ACTTGTCAAC GGACTGGCGA TCGGAAGCGT TTACGCGCTG GCTGCGATCG GATTCGTGAT CGTCTATTCG GCGACCGGTG TGGTGAATTT CGCGGCTGGT CAGTTCGTGA TGTTCGGAAC GTTCGCCGGC GTTGCGACCC TTCTGAATGC GCAGCTGCCC TGGCCATTCG CCTATAGCGC GGCGCTCCTC ATCATGGCGC TGTTCGGAGC GCTGTTTTTC TGTGCCGTCT ATCTGCCGCT GCGGCGCGGA TCCGTCGTCA CGATCATCAT CGGCACCGTC GCCATCAGCA TCACCATGCA GAACGCAGCG CTGCTGTCGT TCGGCTCGTG GCCGTTCCGG CTCCCGTCGC CGGTGGAAGA CAGCGCGGTG ACCCTGGGCG GTGCGATCAT CTCGACCCAT GCGCTCGGCG TCGTCGGCGT GACCGCCATC ATGGTGGCCG GCCTCTGGCT GTTGTTCAAT CGCACCTCCG TCGGCGTCGG CATGCGCGCG GTCGCGCAGG ATTTGCAGGC CGCCAAGCTG ATGGGTCTCA AGGTCAACCG ACTGCTGGCC CTGTCGTGGG TGCTCGCCGC CGTTCTCGCC GGTGTGGCGG GCCTGATGCT CGGACCGATG TGGTTCGCCG ACGTCAATAT GGGTGATCCG ATCGCGTTGA AGGCGTTCGC CGCGACGATC ATCGGTGGTT TTGGCAGTCT TCCGGGGGCG ATCGTCGGCG GTCTGTTCGT CGGCCTCAGC GAGGTGCTCG GCGCGTCCTA TGTGTCGTCG GCCTATAAGG ACCTGATTTC GTTCGGCATC ATGATCGTCT TCTTGCTGGT GCGTCCGCAG GGCGTGTTCG GCGAAAAGAT CCAGGACCGG GGTTGA
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Protein sequence | MADFVQLLVN GLAIGSVYAL AAIGFVIVYS ATGVVNFAAG QFVMFGTFAG VATLLNAQLP WPFAYSAALL IMALFGALFF CAVYLPLRRG SVVTIIIGTV AISITMQNAA LLSFGSWPFR LPSPVEDSAV TLGGAIISTH ALGVVGVTAI MVAGLWLLFN RTSVGVGMRA VAQDLQAAKL MGLKVNRLLA LSWVLAAVLA GVAGLMLGPM WFADVNMGDP IALKAFAATI IGGFGSLPGA IVGGLFVGLS EVLGASYVSS AYKDLISFGI MIVFLLVRPQ GVFGEKIQDR G
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