Gene RPD_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2362 
Symbol 
ID4022851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2636529 
End bp2637404 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content63% 
IMG OID637962555 
Productinner-membrane translocator 
Protein accessionYP_569495 
Protein GI91976836 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.016238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACT TCGTCCAGCT ACTTGTCAAC GGACTGGCGA TCGGAAGCGT TTACGCGCTG 
GCTGCGATCG GATTCGTGAT CGTCTATTCG GCGACCGGTG TGGTGAATTT CGCGGCTGGT
CAGTTCGTGA TGTTCGGAAC GTTCGCCGGC GTTGCGACCC TTCTGAATGC GCAGCTGCCC
TGGCCATTCG CCTATAGCGC GGCGCTCCTC ATCATGGCGC TGTTCGGAGC GCTGTTTTTC
TGTGCCGTCT ATCTGCCGCT GCGGCGCGGA TCCGTCGTCA CGATCATCAT CGGCACCGTC
GCCATCAGCA TCACCATGCA GAACGCAGCG CTGCTGTCGT TCGGCTCGTG GCCGTTCCGG
CTCCCGTCGC CGGTGGAAGA CAGCGCGGTG ACCCTGGGCG GTGCGATCAT CTCGACCCAT
GCGCTCGGCG TCGTCGGCGT GACCGCCATC ATGGTGGCCG GCCTCTGGCT GTTGTTCAAT
CGCACCTCCG TCGGCGTCGG CATGCGCGCG GTCGCGCAGG ATTTGCAGGC CGCCAAGCTG
ATGGGTCTCA AGGTCAACCG ACTGCTGGCC CTGTCGTGGG TGCTCGCCGC CGTTCTCGCC
GGTGTGGCGG GCCTGATGCT CGGACCGATG TGGTTCGCCG ACGTCAATAT GGGTGATCCG
ATCGCGTTGA AGGCGTTCGC CGCGACGATC ATCGGTGGTT TTGGCAGTCT TCCGGGGGCG
ATCGTCGGCG GTCTGTTCGT CGGCCTCAGC GAGGTGCTCG GCGCGTCCTA TGTGTCGTCG
GCCTATAAGG ACCTGATTTC GTTCGGCATC ATGATCGTCT TCTTGCTGGT GCGTCCGCAG
GGCGTGTTCG GCGAAAAGAT CCAGGACCGG GGTTGA
 
Protein sequence
MADFVQLLVN GLAIGSVYAL AAIGFVIVYS ATGVVNFAAG QFVMFGTFAG VATLLNAQLP 
WPFAYSAALL IMALFGALFF CAVYLPLRRG SVVTIIIGTV AISITMQNAA LLSFGSWPFR
LPSPVEDSAV TLGGAIISTH ALGVVGVTAI MVAGLWLLFN RTSVGVGMRA VAQDLQAAKL
MGLKVNRLLA LSWVLAAVLA GVAGLMLGPM WFADVNMGDP IALKAFAATI IGGFGSLPGA
IVGGLFVGLS EVLGASYVSS AYKDLISFGI MIVFLLVRPQ GVFGEKIQDR G