Gene RPD_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2358 
Symbol 
ID4022847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2633043 
End bp2633480 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content65% 
IMG OID637962551 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_569491 
Protein GI91976832 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02803] TonB system transport protein ExbD, group 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.309044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGA AGCTCGGCGC GAAGCGGGCA GGCGGCGACG ACGATCTCGC CGAGACGCAC 
GAAATCAACG TGACGCCGTT CATCGACGTG ATGCTGGTGC TGCTGATCAT CTTCATGGTG
GCCGCGCCGC TCGCCACCGT CGATCTCGGC GTCGATCTGC CGACCAGTAC GGCCGAGCCG
CAGGCCCGCC CGGACAAGCC GATCTTCATT TCGCTGAAAC CCGATCTGTC GCTGGCGCTC
GGCGAACAGG TGATCGCGCG CGAGGCGGTC GGCGCGTCGC TCGGAGCAGC GACAAACGGC
AACAAGGACG AGCGGATATT TCTGCGTGCC GACAAGGCGG TGAGCTACGG TGAATTGATG
GCGGTGATGA ATCTGCTGCG CGACGCCGGC TATCTCAAGG TGGCGCTGGT CGGGCTCGAC
GGCAGGAGTA CGCCATGA
 
Protein sequence
MAVKLGAKRA GGDDDLAETH EINVTPFIDV MLVLLIIFMV AAPLATVDLG VDLPTSTAEP 
QARPDKPIFI SLKPDLSLAL GEQVIAREAV GASLGAATNG NKDERIFLRA DKAVSYGELM
AVMNLLRDAG YLKVALVGLD GRSTP