Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2358 |
Symbol | |
ID | 4022847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2633043 |
End bp | 2633480 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962551 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_569491 |
Protein GI | 91976832 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.309044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTGA AGCTCGGCGC GAAGCGGGCA GGCGGCGACG ACGATCTCGC CGAGACGCAC GAAATCAACG TGACGCCGTT CATCGACGTG ATGCTGGTGC TGCTGATCAT CTTCATGGTG GCCGCGCCGC TCGCCACCGT CGATCTCGGC GTCGATCTGC CGACCAGTAC GGCCGAGCCG CAGGCCCGCC CGGACAAGCC GATCTTCATT TCGCTGAAAC CCGATCTGTC GCTGGCGCTC GGCGAACAGG TGATCGCGCG CGAGGCGGTC GGCGCGTCGC TCGGAGCAGC GACAAACGGC AACAAGGACG AGCGGATATT TCTGCGTGCC GACAAGGCGG TGAGCTACGG TGAATTGATG GCGGTGATGA ATCTGCTGCG CGACGCCGGC TATCTCAAGG TGGCGCTGGT CGGGCTCGAC GGCAGGAGTA CGCCATGA
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Protein sequence | MAVKLGAKRA GGDDDLAETH EINVTPFIDV MLVLLIIFMV AAPLATVDLG VDLPTSTAEP QARPDKPIFI SLKPDLSLAL GEQVIAREAV GASLGAATNG NKDERIFLRA DKAVSYGELM AVMNLLRDAG YLKVALVGLD GRSTP
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