| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2352 |
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| Symbol | |
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| ID | 4022841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2626562 |
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| End bp | 2628004 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962545 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_569485 |
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| Protein GI | 91976826 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.830506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGG CGAATGCGAG GATGAGCGGC GGATCGGCGC ATGGCGCGCA CGACCATCAT
GGCGCGCAGG GGCGCCATCC GGCGCAGGCC GCGGCGCTGC AGGTCAGCGA TTACTTCGTG
CGGATCGGCT GCGATCCGCT GACAGAGGCG TTCGAGAGGC GGTCGTTCTC GCCGCCGTGG
CGCGGCAGCC GGCCGGTCGA CACCGAGGAT GTCGACGCAG TGTTCAAGAG GATCTTCGCG
ACACCGCGGC AGGAGACGGC CGTCGCCTAC GTCCACGTGC CCTTTTGTCA GACGCGCTGC
CTGTTCTGCG GCTTCTTCCA GAATGCCTGG CGTCCGGAGG CCGGGGCCGC TTATGTCGAC
GATCTGCTCG CCGAACTCGC GATCAGATCC ACCACTGCGC TGGTGTCGTC GGCGCCGATC
GACGCGGTCT ATATCGGCGG CGGCACGCCA TCGGCGCTCG CAGCAGACGA TCTCGTGCGT
CTCGTCGAGG GCCTGCGTCA TCATCTGCCG CTGACGAGCG ATTGTGAGAT CACGCTCGAA
GGACGGGCGT TCGGATTCGA TCTGGCCAAG GCCGCGAAGG TGGCGGATGT CGGCGTGACG
CGGATGTCGA TCGGGGTCCA GACGTTCTCG ACCGAGGTGC GGCGTCGGCT CGGCCGAAAG
CTCTCCGGCC CGGAGGTGCA GTCGTTTCTG ACCGATCTGG TCGCGCTCGG CCGCACGGCG
GTTGTCTGCG ATCTGATCTA CGGGCTGCCG GGGCACGACG GGGCGGAATG GTGTCGCGAC
ATCGAGATCG TCGACCAGAT CGGAATCGAC GGCGTCACGC TCTATGCGCT CAACACGTTT
CCCGGCGGGC CGTTGGCGAG CGCGATCGAG AAGGGCAAGC TGTCGCCGCC TGCGACGCCT
GGCGAACAGG CGCGCGCTTA TGCGGATGCG GTGGAGCGGC TCGCTGCGCT CGGCTGGCTG
CAAGTGTCGC AGTCGCATCT GGTTCGTTCG GTGCGCGAGT TCAACCGCTA CAACGCCGCG
ATCAAGCGCG GCGTCACGTG TCTGCCGTTC GGCGCCGGCG CCGGCGGCCA GGCGCACGGC
TATCGCTGGC GCAACGTGAT CGAGATCGCG CAACGTCGCG AGATGATCGC ACAGCATCGC
GAGCCGGTTG AAGCGCTGGC GCTGGTGCCG CCCGATCACG CCGCCCATGC GATGATTGCT
GCAGGACTTG AAGCCGGACG GCTCGACCTC GTCGCGATCG AGGCGCTGCG CCCCGGATTC
CGCGTTGCGG TGGCGCCGCT GCTCGCGAAC TGGGCGGCGG CCGGCCTCGG CGAGTTGAGC
GGCGACGGCT TCAAACCCAA TCATGCCGGT GCGTTCTGGA TCGGCAATTT GACCAGCGGC
CTGTCCGCTG GTTTGCAGTC CGCGACGCAG GCGGAATCAA ACGCCTGCTG CGGTTCGGTG
TGA
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| Protein sequence | MTMANARMSG GSAHGAHDHH GAQGRHPAQA AALQVSDYFV RIGCDPLTEA FERRSFSPPW
RGSRPVDTED VDAVFKRIFA TPRQETAVAY VHVPFCQTRC LFCGFFQNAW RPEAGAAYVD
DLLAELAIRS TTALVSSAPI DAVYIGGGTP SALAADDLVR LVEGLRHHLP LTSDCEITLE
GRAFGFDLAK AAKVADVGVT RMSIGVQTFS TEVRRRLGRK LSGPEVQSFL TDLVALGRTA
VVCDLIYGLP GHDGAEWCRD IEIVDQIGID GVTLYALNTF PGGPLASAIE KGKLSPPATP
GEQARAYADA VERLAALGWL QVSQSHLVRS VREFNRYNAA IKRGVTCLPF GAGAGGQAHG
YRWRNVIEIA QRREMIAQHR EPVEALALVP PDHAAHAMIA AGLEAGRLDL VAIEALRPGF
RVAVAPLLAN WAAAGLGELS GDGFKPNHAG AFWIGNLTSG LSAGLQSATQ AESNACCGSV
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