Gene RPD_2340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2340 
Symbol 
ID4022829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2612477 
End bp2612881 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID637962533 
Productintegral membrane protein 
Protein accessionYP_569473 
Protein GI91976814 
COG category[S] Function unknown 
COG ID[COG5500] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.353146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGGTTCG GCGCGATCGG TTGCGGCCTG ATCGCCGGCG TGGGCATCGC GGCAATGAAT 
GCGACCAACA CCGAGATCGT GCGCTCGGCG TTCATGCCGC TGTTCCTCAG CACTCCGCTG
GCCTCAGCGG TGCTGGCGGC GGCAGGCGTT GTACGCTGGG GTGCGCCCGG CTCCGCCACG
ATCTTCGCCG GCGGCGTGAT CTACGTGCTC GGCATGTTCG TCGTGACGGT TGCCCGCAAC
GTCCCGCTCA ACAACGCGCT GGCGGCGGCG GACAGGGCCA GTGCTGCGGC GGCGGCCGAG
CTATGGGCGA CGTACGTGCG CGACTGGACG TGGTGGAATC ATGGTCGCAC GCTGGCGTCG
ACAGTAGCGT GCGGGTTGTT CGTTGGGGCG CTCCTGACGC GGTAA
 
Protein sequence
MWFGAIGCGL IAGVGIAAMN ATNTEIVRSA FMPLFLSTPL ASAVLAAAGV VRWGAPGSAT 
IFAGGVIYVL GMFVVTVARN VPLNNALAAA DRASAAAAAE LWATYVRDWT WWNHGRTLAS
TVACGLFVGA LLTR