| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2331 |
|---|
| Symbol | |
|---|
| ID | 4022820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2600864 |
|---|
| End bp | 2601739 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637962524 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_569464 |
|---|
| Protein GI | 91976805 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.219486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCA ATATCCAGGC CCTGTTGGCG CAGCTTCTGG TCGGGCTGAT CAACGGTTCG
TTCTACGCCT TGCTGAGTCT CGGCCTCGCC GTGATCTTCG GCATGCTCAA CATCATCAAC
TTCGCCCACG GCGCGTTGTA TATGATGGGC GCGTTCTGCG CCTATTTCCT GCTGAACCTG
TTCGGCATCG GCTATTGGTG GGCGCTGATC CTGGCGCCGC TCACGGTCGG CCTGTTCGGG
ATGCTGATGG AGCGCACGCT GCTGCAATGG CTGTCCGGGC TCGACCATCT CTACGGACTG
CTGCTGACCT TCGGCGTGGC GCTGATCATC CAGGGCGTGT TCCAGAATTA TTTCGGCTCG
TCGGGTCTGC CTTATGCGAT CCCCGACGAA CTCAAGGGCG GCGTCAATCT CGGCTTCATG
TTCCTACCGA TCTATCGCGG CTGGGTGGTG GCGTTCTCGC TCGTGATCTG CCTGTTGATC
TGGTACCTGA TCGAGCGCAC CCGGCTCGGC GCCAATCTGC GTGCCGCCAC GGAGAATCCG
ACATTGGTGC GCGCCTTCGG CATCAACGTG CCGCGGATGA TCACGCTGAC CTACGGGCTC
GGCGTCGGTC TCGCCGCGCT CGCCGGTGTG CTGTCGGCGC CGATCAACCA GGTGCGGCCG
CTGATGGGCG CCGACCTGAT CATCGTGGTG TTCGCGGTGG TGGTGATCGG CGGCATGGGC
TCGATCATGG GCTCGATCAT TACCGGCTTT GCGCTGGGCG TGATCGAAGG CCTGACCAAA
TATTTTTACC CCGAGGCCTC CAATACCGTG GTGTTCGTGC TGATGGTGCT GGTGCTGCTT
GTAAAACCCT CGGGCCTGAC GGGACGGGCA ACCTGA
|
|---|
| Protein sequence | MSINIQALLA QLLVGLINGS FYALLSLGLA VIFGMLNIIN FAHGALYMMG AFCAYFLLNL
FGIGYWWALI LAPLTVGLFG MLMERTLLQW LSGLDHLYGL LLTFGVALII QGVFQNYFGS
SGLPYAIPDE LKGGVNLGFM FLPIYRGWVV AFSLVICLLI WYLIERTRLG ANLRAATENP
TLVRAFGINV PRMITLTYGL GVGLAALAGV LSAPINQVRP LMGADLIIVV FAVVVIGGMG
SIMGSIITGF ALGVIEGLTK YFYPEASNTV VFVLMVLVLL VKPSGLTGRA T
|
|---|
| |