Gene RPD_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2330 
Symbol 
ID4022819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2600078 
End bp2600824 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content65% 
IMG OID637962523 
ProductABC transporter related 
Protein accessionYP_569463 
Protein GI91976804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.109731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGA CGACGACTTT GGACCGCACC AAGGCGGCAT CGGCCGGCAA TGCGTTGTTG 
AGCGTGCGCG ATCTGCAGGC GTGGTACGGC GAGTCCCACA TTCTGCACGG CATGGACTTC
GAGGTCCGCA CCGGCGAGGT GGTGACGCTG CTGGGCCGCA ACGGCGCTGG CAAAACCACC
ACGCTGAAAT CGGTGATGGG CATCATCGGC AAGCGCACCG GCGCCATCAC CTTCGACGGT
CACGACATCA GCCGGGCCTC GTCGGACAAG ATCGCGCGGC GCGGCATCGC GTTCTGCCCG
GAGGAGCGTG GTATCTTCGC CAGCCTCGAC GTCCGCGAGA ACCTGATGCT GCCGCCGCAG
GTCCGGCCCG GCGGGCTGTC GCAGGAGCAG ATCTTCGAAC TGTTCCCGAA CCTGCGCGAG
CGGCTGAAAA GCCAGGGCAC CAAGCTGTCG GGCGGCGAGC AGCAAATGCT GGCGATCGCA
CGCATCCTGC GCACCGGCGC GCGCTTCCTG ATGCTCGACG AGCCGACCGA GGGCCTTGCT
CCGGTGATCA TCCAGCAGAT CGGCCGCACC ATCGCGCGGC TGAAGACGGA AGGCTTCACC
ATCCTGCTGG TGGAGCAGAA CTTCCGCTTC GCTGCGACGG TGGCCGATCG CTACTACGTG
GTCGAGCACG GCAAGATCAT CGACGGCTTC GCCAATTCGG AGCTCGAGGC CAACATGGAC
AAGCTTCACA CCTATCTCGG CGTGTGA
 
Protein sequence
MVETTTLDRT KAASAGNALL SVRDLQAWYG ESHILHGMDF EVRTGEVVTL LGRNGAGKTT 
TLKSVMGIIG KRTGAITFDG HDISRASSDK IARRGIAFCP EERGIFASLD VRENLMLPPQ
VRPGGLSQEQ IFELFPNLRE RLKSQGTKLS GGEQQMLAIA RILRTGARFL MLDEPTEGLA
PVIIQQIGRT IARLKTEGFT ILLVEQNFRF AATVADRYYV VEHGKIIDGF ANSELEANMD
KLHTYLGV