Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2330 |
Symbol | |
ID | 4022819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2600078 |
End bp | 2600824 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637962523 |
Product | ABC transporter related |
Protein accession | YP_569463 |
Protein GI | 91976804 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.109731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAGA CGACGACTTT GGACCGCACC AAGGCGGCAT CGGCCGGCAA TGCGTTGTTG AGCGTGCGCG ATCTGCAGGC GTGGTACGGC GAGTCCCACA TTCTGCACGG CATGGACTTC GAGGTCCGCA CCGGCGAGGT GGTGACGCTG CTGGGCCGCA ACGGCGCTGG CAAAACCACC ACGCTGAAAT CGGTGATGGG CATCATCGGC AAGCGCACCG GCGCCATCAC CTTCGACGGT CACGACATCA GCCGGGCCTC GTCGGACAAG ATCGCGCGGC GCGGCATCGC GTTCTGCCCG GAGGAGCGTG GTATCTTCGC CAGCCTCGAC GTCCGCGAGA ACCTGATGCT GCCGCCGCAG GTCCGGCCCG GCGGGCTGTC GCAGGAGCAG ATCTTCGAAC TGTTCCCGAA CCTGCGCGAG CGGCTGAAAA GCCAGGGCAC CAAGCTGTCG GGCGGCGAGC AGCAAATGCT GGCGATCGCA CGCATCCTGC GCACCGGCGC GCGCTTCCTG ATGCTCGACG AGCCGACCGA GGGCCTTGCT CCGGTGATCA TCCAGCAGAT CGGCCGCACC ATCGCGCGGC TGAAGACGGA AGGCTTCACC ATCCTGCTGG TGGAGCAGAA CTTCCGCTTC GCTGCGACGG TGGCCGATCG CTACTACGTG GTCGAGCACG GCAAGATCAT CGACGGCTTC GCCAATTCGG AGCTCGAGGC CAACATGGAC AAGCTTCACA CCTATCTCGG CGTGTGA
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Protein sequence | MVETTTLDRT KAASAGNALL SVRDLQAWYG ESHILHGMDF EVRTGEVVTL LGRNGAGKTT TLKSVMGIIG KRTGAITFDG HDISRASSDK IARRGIAFCP EERGIFASLD VRENLMLPPQ VRPGGLSQEQ IFELFPNLRE RLKSQGTKLS GGEQQMLAIA RILRTGARFL MLDEPTEGLA PVIIQQIGRT IARLKTEGFT ILLVEQNFRF AATVADRYYV VEHGKIIDGF ANSELEANMD KLHTYLGV
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