Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2329 |
Symbol | |
ID | 4022818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2599330 |
End bp | 2600085 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637962522 |
Product | ABC transporter related |
Protein accession | YP_569462 |
Protein GI | 91976803 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.170291 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTGATG ACATCATCCT TGAGACGCAA GGTCTGACGA AGGAGTTTGC GGGCTTCTTC GCGGTCCGTG ACGTCAATCT GCGTGTAAAG CGTGGGCATA TTCACGCGCT GATCGGTCCC AACGGAGCCG GCAAGACCAC GTGTTTCAAT CTGCTCACGA AGTTCCTGCA GCCTTCGGCC GGCAAAATTC TCTACAAGGG ACAGGACATC AGCGCGATGG CGCCGGCCGA TGTGGCGCGG CTCGGGCTGG TGCGATCGTT CCAGATTTCG GCGGTTTTCC CGCATCTGAC GGCGCTGGAG AACGTCCGCG TCGCGCTGCA GCGCCAGCAC GGCCACTCGT TCGATTTCTG GCGCTCCAAG AGCGTGCTCG ACCGCTTCAA TCATCGCGCT GGCGAACTGC TCGACGACGT CGGCCTCAGC GAGTTTTCGG ACACCCCCGC GGTCGAGATG CCCTATGGCC GCAAGCGCGC GCTGGAGATC GCCACCACGC TGGCGCTCGA TCCGGAGATG ATGTTGCTCG ACGAGCCGAT GGCCGGCATG GGCCACGAGG ACATCGACAA GATCGCCGCG CTGATCAAGC GGATCTCGGC GAAGTACACC ATCCTGATGG TCGAGCATAA TCTCAGCGTC GTCGCCAATC TGTCCGATAT CATCACGGTG CTGACCCGCG GTCAGGTGTT GGCCGAAGGC CATTACAATG ACCTCACTCA GGACGATCGC GTCAAGGAAG CCTATCTCGG AGCGGGTCAT GGTTGA
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Protein sequence | MADDIILETQ GLTKEFAGFF AVRDVNLRVK RGHIHALIGP NGAGKTTCFN LLTKFLQPSA GKILYKGQDI SAMAPADVAR LGLVRSFQIS AVFPHLTALE NVRVALQRQH GHSFDFWRSK SVLDRFNHRA GELLDDVGLS EFSDTPAVEM PYGRKRALEI ATTLALDPEM MLLDEPMAGM GHEDIDKIAA LIKRISAKYT ILMVEHNLSV VANLSDIITV LTRGQVLAEG HYNDLTQDDR VKEAYLGAGH G
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