Gene RPD_2329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2329 
Symbol 
ID4022818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2599330 
End bp2600085 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content61% 
IMG OID637962522 
ProductABC transporter related 
Protein accessionYP_569462 
Protein GI91976803 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.170291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGATG ACATCATCCT TGAGACGCAA GGTCTGACGA AGGAGTTTGC GGGCTTCTTC 
GCGGTCCGTG ACGTCAATCT GCGTGTAAAG CGTGGGCATA TTCACGCGCT GATCGGTCCC
AACGGAGCCG GCAAGACCAC GTGTTTCAAT CTGCTCACGA AGTTCCTGCA GCCTTCGGCC
GGCAAAATTC TCTACAAGGG ACAGGACATC AGCGCGATGG CGCCGGCCGA TGTGGCGCGG
CTCGGGCTGG TGCGATCGTT CCAGATTTCG GCGGTTTTCC CGCATCTGAC GGCGCTGGAG
AACGTCCGCG TCGCGCTGCA GCGCCAGCAC GGCCACTCGT TCGATTTCTG GCGCTCCAAG
AGCGTGCTCG ACCGCTTCAA TCATCGCGCT GGCGAACTGC TCGACGACGT CGGCCTCAGC
GAGTTTTCGG ACACCCCCGC GGTCGAGATG CCCTATGGCC GCAAGCGCGC GCTGGAGATC
GCCACCACGC TGGCGCTCGA TCCGGAGATG ATGTTGCTCG ACGAGCCGAT GGCCGGCATG
GGCCACGAGG ACATCGACAA GATCGCCGCG CTGATCAAGC GGATCTCGGC GAAGTACACC
ATCCTGATGG TCGAGCATAA TCTCAGCGTC GTCGCCAATC TGTCCGATAT CATCACGGTG
CTGACCCGCG GTCAGGTGTT GGCCGAAGGC CATTACAATG ACCTCACTCA GGACGATCGC
GTCAAGGAAG CCTATCTCGG AGCGGGTCAT GGTTGA
 
Protein sequence
MADDIILETQ GLTKEFAGFF AVRDVNLRVK RGHIHALIGP NGAGKTTCFN LLTKFLQPSA 
GKILYKGQDI SAMAPADVAR LGLVRSFQIS AVFPHLTALE NVRVALQRQH GHSFDFWRSK
SVLDRFNHRA GELLDDVGLS EFSDTPAVEM PYGRKRALEI ATTLALDPEM MLLDEPMAGM
GHEDIDKIAA LIKRISAKYT ILMVEHNLSV VANLSDIITV LTRGQVLAEG HYNDLTQDDR
VKEAYLGAGH G