Gene RPD_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2302 
Symbol 
ID4022789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2568499 
End bp2569365 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID637962495 
Productpyridoxal kinase 
Protein accessionYP_569435 
Protein GI91976776 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase 
TIGRFAM ID[TIGR00687] pyridoxal kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTC GGACGATGCC GATGACGACC TCCATCATCT CGATCCAGAG CCAAGTCGTG 
CATGGGCATG TCGGCAACAG CGCCGCCGTG CTGCCCATGC AGGCGCACGG GCTGAACGTG
GCGGCGGTGC CGACGACGCT GCTCTCCAAC CCGCCAGGCT TCGCAACCAT GCGCGGCCGC
GTGTTGGAGC CTGAACTTGT CGGCGATCTG CTGCGAGGCG TCGAGGAACG CGGCCTGCTC
GAGACCAGCC GCTATATCGT CTCCGGCTAT CTCGGCTCCC GCGCCAATGG CGAAGTGGTC
GCGGCCTTCA TCAAACGGGC GCGGCAGATC AATCCGGCCA TCACCTATAT CTGCGATCCG
GTGATGGGAG ACGCCCATCT CGGGGTGTTC GTCGCCGATC AGGTGGTCGA GTGCCTGTGC
GACGCGTTGG TCCCGCTCGC CGACCTCTTG ACGCCCAACC AGTTCGAAAT CGGGCTGATC
ACGGGCCGTC AGCTATCGAC ATGGAACGAA CTCGAGACGG CGGCGCTGCA GATCCAGGCA
GCGCGCGGCG CCCGGCTGGT CGTCACCAGT TGCAAGCTTA GCGATACGCC GGAAGGCACG
CTGGAGAACA TCGTGTTCGA GGACAAGTCG AGTACGCGGC TGACATCGCC GCGCCTGCCG
ATGGCGCCGG TCGGAACAGG CGATCTCTAC ACCGGCCTGC TGACTGCCAA GCTCGCGCGC
GGCGCCACCT TGGTCGAGGC CGCGCGCCAA GCCGCCGCCA CCGTGCTTCA AGTTCTGGGA
CAGACCATGG CGGCCGACGA ACACGAAATG CAACTCGCCA GCGTCATCGA TACGCTTGGC
CCCGCCTGCA AGGAGCCTTC GCAATGA
 
Protein sequence
MKPRTMPMTT SIISIQSQVV HGHVGNSAAV LPMQAHGLNV AAVPTTLLSN PPGFATMRGR 
VLEPELVGDL LRGVEERGLL ETSRYIVSGY LGSRANGEVV AAFIKRARQI NPAITYICDP
VMGDAHLGVF VADQVVECLC DALVPLADLL TPNQFEIGLI TGRQLSTWNE LETAALQIQA
ARGARLVVTS CKLSDTPEGT LENIVFEDKS STRLTSPRLP MAPVGTGDLY TGLLTAKLAR
GATLVEAARQ AAATVLQVLG QTMAADEHEM QLASVIDTLG PACKEPSQ