| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2290 |
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| Symbol | |
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| ID | 4022775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2554273 |
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| End bp | 2556282 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637962482 |
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| Product | ATP-dependent OLD family endonuclease |
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| Protein accession | YP_569423 |
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| Protein GI | 91976764 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.23738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTCA AGAATATGAA GCTCAACAGC TTTCGATCTT TCGACCAAGG AGAGATCGAA
CTCCAAAAAG ACTTGACGGT CTTCGTGGGT GAAAACAACG GAGGCAAAAG CAACGCGATC
GACGCAGTTC GCCTGCTTAC AACGCCTCTC GGTGGTCGAC GGGAAATTTA TTGCGAGTCC
ACAGACGTTC GCTTTCAGAG CACGACCACC TACTTCGAGT TGGAGGGGTG CTTCGCAGAG
CTTTCAACGG GGCAGCAAGG GCGCTTCATT TCGGCCGCCA CAGACGCCTC GTTGACCCAG
GCGCGTTTCG GCCTGCGTTT CGATGGCGCT CGATCGGGCA TCAAGCCGGT GCTCTGGGCC
GGCAAGGAAG GAAACTCGGC CGAACCAGGC TGCCATGAGA TGGTCCGGCA TGTTTACCTG
CCGCCGCTCC GTGACGCGAA GCGCTCTCTG GCGTCCGGCA ATCCTACGCG AATCATGGCG
CTCCTAAATC ACTTCCTCGA GGGGACGACG CCCGCACAGC TCGCGAAAGA ACTTGGGCGC
ACCCACTCGC ATGATGTCCT CGTCAAAGTA GACGGTGCAG TCGAGAAGGG TCTGTCAGCG
CTGACGTCGG GGGTTCGCCG ACAAACAGCT TCGCTCGGAT TCTCTACGGA CGAAGCCTTG
GTGGATATCG CCCGAGACCT GAGATTCAAG CTCGCCGACC ACGGCGTCGA CCCCGAAGAC
CTCCGGTATT CCGGACACGG ATACGCAAAT CTCCTGTTCA TGGCGATCAT CGCGGTAGAG
CTTGAGAAGG TCCGATCAGC CGACCTCACG CTGTTCCTCG TCGAGGAGCC TGAGGCGCAT
CTTCATCCGC AGCTTCAGGC GGCCGTCCTC GCCTTCTTGA GAGACCAGGC CGAGCAATCG
CGCAAAGACG CGCCCACTGA CCACGCTCCA TCTGGTGAAC TCCAGGTCAT CGTCGCGACG
CATTCCCCGA ACCTTTCGGC GTGGGTCAAC AGTGACCGAC TCGTCGTGTT CAAGTCCGTC
GTGGCGAGCG CCGAGCAGGC GCCTGCTGGC GAACCAACCA TCGAGCCGAC CGTCGCCGAC
GCGGCGGTCA TCGGAAGTGG GCTGGGCACC GACCACACCG AAGCTGACGT GACGGGCACC
GATGCGCTCA CCGCCACCAT GACGGCGGCG GCGCTTCGCA GGTCCACCCG CTGCATTCCC
TTGTCGTTGA TGCAGCTTGA TGCGCTGGAG CGCCGCAAGG TCGATCGCTA CCTCGATGTC
ACCAAGGCGG CGCTTCTCTT CGGCGGACGA GTCTTGCTGG TCGAAGGAAT CGCAGAAGCC
CTTCTCCTCC CGGCCATCGC AAAGCATCAC ACGCTGAAGG AACATCCCGA CCAACTCCGT
CTGTTCAGAT CAACGGTGTT CGTCCCCATC GATGGCGTCG ATTTCAGCCC GTACGCGACC
CTGCTGCTGA CGACGGTCAA TGGAGCGCGC ATCGCGGACC GTGTCGTCAT CCTGACGGAC
GGAGACAAAG GTACGGGCGA CAGCGACGAT GACGATGACG ATGAAGAGGA GCTGCCGAGC
GACACCGTGG AAAAGGTCCC AGCTAACCCC GCTCTGGAAC AAGACACACC CGTGGTATCC
GACGCGGATG ATGCGATCGA CGCGGAGGAG CCACCTATTC CAGGTGAGAT GCGCAAGGCT
GCACTAATGA GCCTGGCTAG CTCGCTGGGC GCGAGCGAGC ATCTTGCGGC GGTCACGAGC
ATCTATTCGC TAGAGACCGA GCTGCTGGAG GCGGGCAATA CCGCCATCCT TCGCAAGGCG
TACCTGACGC TTCACCCAAG ATCGAAAAAG AAATGGGACA ACGCCGTTGC GCTCAGCGGC
GATGAACGCG CCAAGAAAAT CCATGAGATA TTCAAAAAGA CCCGCAAGGG CGATTTCGCT
CAGATTCTCG CGCGTCTGAT CGAGGATGGC GACGCATTTG TAGTCCCCGA CTACATCGCG
AAGGCCATTG AGGAGGTCGT TGTCCCGTGA
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| Protein sequence | MYLKNMKLNS FRSFDQGEIE LQKDLTVFVG ENNGGKSNAI DAVRLLTTPL GGRREIYCES
TDVRFQSTTT YFELEGCFAE LSTGQQGRFI SAATDASLTQ ARFGLRFDGA RSGIKPVLWA
GKEGNSAEPG CHEMVRHVYL PPLRDAKRSL ASGNPTRIMA LLNHFLEGTT PAQLAKELGR
THSHDVLVKV DGAVEKGLSA LTSGVRRQTA SLGFSTDEAL VDIARDLRFK LADHGVDPED
LRYSGHGYAN LLFMAIIAVE LEKVRSADLT LFLVEEPEAH LHPQLQAAVL AFLRDQAEQS
RKDAPTDHAP SGELQVIVAT HSPNLSAWVN SDRLVVFKSV VASAEQAPAG EPTIEPTVAD
AAVIGSGLGT DHTEADVTGT DALTATMTAA ALRRSTRCIP LSLMQLDALE RRKVDRYLDV
TKAALLFGGR VLLVEGIAEA LLLPAIAKHH TLKEHPDQLR LFRSTVFVPI DGVDFSPYAT
LLLTTVNGAR IADRVVILTD GDKGTGDSDD DDDDEEELPS DTVEKVPANP ALEQDTPVVS
DADDAIDAEE PPIPGEMRKA ALMSLASSLG ASEHLAAVTS IYSLETELLE AGNTAILRKA
YLTLHPRSKK KWDNAVALSG DERAKKIHEI FKKTRKGDFA QILARLIEDG DAFVVPDYIA
KAIEEVVVP
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