Gene RPD_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2283 
Symbol 
ID4022768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2546920 
End bp2547426 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content59% 
IMG OID637962475 
Producthypothetical protein 
Protein accessionYP_569416 
Protein GI91976757 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.353582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA CGGTATTCGA CTCCGATGCA TCGCTCGACG AGCGCCGTAT CATCATAAGG 
CGCGACGGCG ACGATGTTGA GATAGTGGAC CTGCCCTGGG GACTTCAACC CCGTGAAGCT
GAGGGCCGCC CCTTCACTGT CGTCCGCGCA GAAGGCAGAA CGTTTCCCAG TCATCGCTGC
CTGATACCGG CTTCCGAATT CCGCCATCGT AGTCACGGCA AACACTATAG CTTCTCCCTC
TCCAACGGTG ACTGGTTCTA CTTCGCGGGG ATCTGGCAGC CTGCAACACG TCAATGGCCA
GAGGCCTATG CGATCCTTTC GACGACGGCG AATGACGATG TCTCCCCGTA CCATGATCGG
CAAATGGCGA TCTTGCGGCG TGACCAGCGA ATGGATTGGC TCGATCTCAC CGTGCCCGAG
AATGAACTCC TGCGACCGCT GCCTGCCGGA AGCTTCAATG TCGCACGCTT GCAAGAGCAC
AACGCCCAGG ACGCACTCGC GTTCTGA
 
Protein sequence
MSATVFDSDA SLDERRIIIR RDGDDVEIVD LPWGLQPREA EGRPFTVVRA EGRTFPSHRC 
LIPASEFRHR SHGKHYSFSL SNGDWFYFAG IWQPATRQWP EAYAILSTTA NDDVSPYHDR
QMAILRRDQR MDWLDLTVPE NELLRPLPAG SFNVARLQEH NAQDALAF