Gene RPD_2278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2278 
Symbol 
ID4022763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2543178 
End bp2543468 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content62% 
IMG OID637962470 
Producttransposase IS3/IS911 
Protein accessionYP_569411 
Protein GI91976752 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.19411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAC GAAAGTTCAG CCGAGAATTC AAGGTCGAGG CGGTCAAGCT TGTCAGGGAA 
CGCGGGGTAT CGGTAGCCCA GGCCGGGCGG GACCTGGACG TTCATGAGAA CGTGCTGCGC
AAATGGGTGA AGGAGTTCGG CTCCGATCCT GTGCAGGCTT TCCCCGGCCA TGGCCAGATG
AAGCCGGAGC AGTTGGAGAT CGAGCGGCTG CGGCGCGAGG TCCAGAAGCT GAAGGCAGAG
CGGGATATCC TAAAAAACTC TCCAGGGCCG TTGCACGCCT GCGCGGGGTA G
 
Protein sequence
MQRRKFSREF KVEAVKLVRE RGVSVAQAGR DLDVHENVLR KWVKEFGSDP VQAFPGHGQM 
KPEQLEIERL RREVQKLKAE RDILKNSPGP LHACAG