Gene RPD_2265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2265 
Symbol 
ID4022750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2529876 
End bp2530901 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID637962460 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_569401 
Protein GI91976742 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.808445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.209407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGG GTCAGCGTAT CGTTCTTGCC TCGCGTCCGA CTGGGGAGCC GACGGCGGCG 
AATTTCCGTC TCGAGGAGTT TGACGTGCCG GCGCCGGGCG AGGGGCAGGT GCTGCTGCGC
ACGATCTGGC TGTCGCTCGA CCCTTATATG CGCGGCCGTA TGAGCGACGG ACCGTCTTAT
GCCCAGCCGG TGCCTGTCGG CGGCGTGATG GAAGGCGGCA CGGTCTGCGA GGTGCTCGAT
TCCAACAGCC CGGGCTTCGC CAAGGGCGAT ATCGTCCTGG CGCATGCCGG CTGGCAGACC
CACGCGCTCG CCGATCCGAA GCCGCTGCGC AAGATCGATC CGTCGCTCGG GCCGATCTCG
ACCGCAGTGG GCGTGCTCGG GATGCCGGGC ATGACGGCCT ACACCGGGCT GCTGGACATC
GGCCAGCCGA AGGAAGGCGA GACCGTCGTG GTCGCCGCGG CCTCCGGCGC GGTCGGCTCC
GCCGTCGGAC AGATCGCGAA AATCAAGGGG GCGCGCGCGG TCGGCATCGC CGGCGGCAAG
GCGAAATGCG ACTACGTCAA GAACGAGCTC GGCTTCGATG ACTGCCTCGA CCACCGCGAT
CCGGACCTCG CCGCCAAGCT GAAGGCGGCG TGTCCGAAAG GGATCGACGT GTATTTCGAG
AATGTCGGCG GCGAGGTGTT CGAGGCGGTG TTTCCGTTGC TCAACGCTTT CGCCCGCATT
CCGGTGTGCG GCCTGATCGC GCAGTACAAC GCCTTCGAAG CGCCGCCGAC GCCGAAATGG
GCGGGCGCGA TGATGCGTCA TGTGCTGACC AAGCGGCTCA CCATCCGCGG CTTCATCGTC
AGCGATTTCG CGGGACGGCG TCAGGAGTTC TTGCGGGATA TGTCGGAGTG GGTCCGCGAC
GGCAAGGTGA AGTATCGCGA GTTCGTCACC GAGGGAGTGG AGAGCGCGCC GTCAGCGTTC
ATCGGTCTGC TGAAGGGCGC CAATTTCGGC AAGCAACTCG TCCGCGTTGG GCCGGATCGC
GCGTAA
 
Protein sequence
MSKGQRIVLA SRPTGEPTAA NFRLEEFDVP APGEGQVLLR TIWLSLDPYM RGRMSDGPSY 
AQPVPVGGVM EGGTVCEVLD SNSPGFAKGD IVLAHAGWQT HALADPKPLR KIDPSLGPIS
TAVGVLGMPG MTAYTGLLDI GQPKEGETVV VAAASGAVGS AVGQIAKIKG ARAVGIAGGK
AKCDYVKNEL GFDDCLDHRD PDLAAKLKAA CPKGIDVYFE NVGGEVFEAV FPLLNAFARI
PVCGLIAQYN AFEAPPTPKW AGAMMRHVLT KRLTIRGFIV SDFAGRRQEF LRDMSEWVRD
GKVKYREFVT EGVESAPSAF IGLLKGANFG KQLVRVGPDR A