Gene RPD_2264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2264 
Symbol 
ID4022749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2528129 
End bp2529625 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content67% 
IMG OID637962459 
Productinosine 5'-monophosphate dehydrogenase 
Protein accessionYP_569400 
Protein GI91976741 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG0517] FOG: CBS domain 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.334086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAT TGAACGGATC TCAGCAATTT CGCGAAGCCT ACACGTTCGA CGACGTGTTG 
CTGAAGCCAG GCCCCTCCGA CGTGATGCCG TCCGAGGTCG ACATCCGGTC CCGCATCACC
CGGGCGATCC CGTTAAATGT CCCGATCATC GCCTCGGCGA TGGACACCGT GACCGAGGCG
CGGATGGCGA TCGCGATGGC GCAGGTCGGC GGCATCGGCG TCATTCATCG CAACTTCGAT
CCCGAGGGCC AGGCCGCGCA GGTCCGCCAG GTCAAGAAAT TCGAATCCGG CATGGTGGTC
AATCCGCTGA CCATCGGCCC CGACGCCAAG CTCGCCGACG CGCTGGCGCT GATGAACCAA
TACGGCTTCT CCGGCATCCC GGTGGTGACC GGCGCCGAGG GCCGCGGCCC GGGCAAGCTG
ATCGGCATCC TGACCAACCG CGACGTGCGC TTTGCGACCG ACCCGTCGCA GAAGGTCTCG
GAACTGATGA CGCACGAGAA CCTCGTGACG GTGCGCGAGG GCGTCAGCCA GGACGAGGCC
AAGCGGATGC TGCACAAGCA CCGCATCGAG AAGCTGCTGG TGGTCGACGA TCAGTATCGC
TGCGTCGGCC TGATCACCGT CAAGGACATG GAGAAGGCGG TCGCGCATCC GCTGGCCAGC
AAGGACGCGC AGGGCCGCCT CCGCGTCGCC GCCGCGACCA CCGTCGGCGA AGGCGGCTTT
GAACGCACCG AGGCCCTGAT CGAGGCCGGC GTCGACGTCA TCGTCGTCGA CACGGCGCAT
GGCCATTCGG CCCGCGTGCT CGAGGCGGTG AACCGGATCA AGCGGCTCTC CAACGCGGTT
CAGGTGGTGG CCGGCAACAT CGCGACACGC GACGGCGCGC AGGCGCTGAT CGACGCCGGC
GCCGACGCCA TCAAGGTCGG CATCGGCCCG GGCTCGATCT GCACCACGCG GATGGTCGCC
GGCGTCGGCG TGCCGCAGCT CACCGCGATC ATGGACGCGG TCGAGGCGGC GAAAAAGGCC
GATATCCCGG TGATCGCCGA CGGCGGCATC AAATATTCCG GCGACCTCGC CAAGGCGCTC
GCCGCTGGCG CCGACATCGC CATGGTCGGC TCGCTGCTCG CCGGCACCGA CGAAACCCCC
GGCGAAGTGT TCTTGTGGCA GGGCCGCTCC TACAAGGCCT ATCGCGGCAT GGGCTCGGTC
GGCGCGATGT CGCGCGGCTC GGCCGACCGC TACTTCCAGC AGGACATCAA GGACACGCTG
AAGCTGGTGC CGGAAGGCAT CGAGGGCCAG GTGCCCTACA AGGGTCCGGT CGGCAATGTC
GTCCATCAGC TCGCCGGTGG TCTGCGCGCC GCGATGGGTT ACGTCGGCGC CCGCACGCTC
ACAGAACTTC ACGACAAGGC CGATTTCGTC CGCATCACCG GCGCCGGCCT GCGCGAAAGC
CACGTCCACG ACGTCGTCAT CACCCGCGAG AGCCCGAACT ATCCGGGCGG GGTGTGA
 
Protein sequence
MASLNGSQQF REAYTFDDVL LKPGPSDVMP SEVDIRSRIT RAIPLNVPII ASAMDTVTEA 
RMAIAMAQVG GIGVIHRNFD PEGQAAQVRQ VKKFESGMVV NPLTIGPDAK LADALALMNQ
YGFSGIPVVT GAEGRGPGKL IGILTNRDVR FATDPSQKVS ELMTHENLVT VREGVSQDEA
KRMLHKHRIE KLLVVDDQYR CVGLITVKDM EKAVAHPLAS KDAQGRLRVA AATTVGEGGF
ERTEALIEAG VDVIVVDTAH GHSARVLEAV NRIKRLSNAV QVVAGNIATR DGAQALIDAG
ADAIKVGIGP GSICTTRMVA GVGVPQLTAI MDAVEAAKKA DIPVIADGGI KYSGDLAKAL
AAGADIAMVG SLLAGTDETP GEVFLWQGRS YKAYRGMGSV GAMSRGSADR YFQQDIKDTL
KLVPEGIEGQ VPYKGPVGNV VHQLAGGLRA AMGYVGARTL TELHDKADFV RITGAGLRES
HVHDVVITRE SPNYPGGV