| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2257 |
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| Symbol | |
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| ID | 4022742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2519972 |
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| End bp | 2522347 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962452 |
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| Product | carbon-monoxide dehydrogenase |
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| Protein accession | YP_569393 |
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| Protein GI | 91976734 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.336955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACC ATACCTCGAA CGCGTCGCTC GACACCGCTA TCGCACTGCA AAAATTCGGC
GTCGGCCAGC CGGTCCGGCG CAAGGAAGAC GACACGCTGG TTCGCGGCAA GGGACACTAC
ACCGACGATT TCAACCTGCC CGGCCAGCTG TTTGCGGTGA TGGTCCGCAG CCCGCACGCC
CATGGGGTGC TTCGCGGCAT CAACGCCGAG GCGGCGCGCG GCATGGCGGG CGTCCGCGGC
GTGTTCACCG GCGCGGACCT CGCCAGCGCC AATTACGCCC CGTTCACCTG CGGCCTGCCG
CTCAAAAATC GTGACGGCAC GCCGCTGCAT CAGACCAACC GCCACGCGCT GGCCACCGAC
AAGGTCCGCT TCGTCGGCGA TCCGGTGGCG TGCGTCGTTG CCGACACTTT GGCGCAGGCG
CGTGACGCCG CAGAGGCCGT CGAGCTCGAC ATCGAGCCGC TGCCCGCCGT CACCGAGGCC
GACGAAGCGA CCAAGCCCGG CGCGCCGCAG CTCTACGATC ACATCGAAAA CAACGTCGCG
CTCGATTATC ACTTCGGCGA CGCCGAGGCC GTGAACGCCG CCTTCGCTTC GGCCGCGCAT
GTCACCAGGC TCGACATCGA GAACAGCCGC GTCGCGGTGG TGTCGATGGA GCCGCGCGCA
GGCCTCGCCT GCTACGACAG GAACGACGGC CGCTACACCA TTCAGGTGCC GACCCAGGGC
GTCGCCGGTA ACCGCAACGG CCTCGCCAAA TTGCTCGGCG TGCCCAACGA CAAGGTCCGC
CTGCTCACAG GCCATGTCGG CGGCTCATTC GGGATGAAGA ACATCAACTA TCCCGAATAT
ATCTGCATCC TGCACGCGGC GAAGGCGCTC GGACGTCCGG TGAAGTGGAC CGACGAGCGC
TCGACCGCGT TCCTGTCCGA CAGCCACGGC CGCGGCCAGC AGATCCACGC CGAGCTTGCG
CTCGACGCCG CCGGCAAGTT CCTGGCGATC CGCATCTCCG GCACCGGCAA TCTCGGCGCC
TACATCACCG GCGTTGCGCC GCTGCCGCTG TCGCTCAACA TCGGCAAGAA TATCGGCAGC
GTCTATCGCA CGCCGCTGCT ATCGGTCGAC ATCAAATGCG TGCTCACCAA CGTCACGCTG
ATGGGCGCCT ATCGCGGCGC CGGGCGTCCC GAGGCCAATT ACTATCTCGA ACGACTGATC
GACCGCGCCG CCGATGAAAT GAGCATCGAC CGGCTGACAC TGCGCAAACG CAACTTCATC
AAGCCCTCGC AGATGCCGTT CAAGGCCTGT TCGGGCGTCA CCTATGATTG CGGCGACTTC
GCCGGCGTGT TCGCTCACGC GCTGGAGCTG GCGGACTACG CCGGCTTTTC GAAGCGCAAG
AAGGACAGCC GCAAGCGCGG CAGGCTGCGC GGCATCGCGG TCGGCTCCTA TCTCGAAGTC
ACCGCGCCGC CGAACAGCGA ACTCGGCAAG ATCGTGTTCG AAGCCGATGG CCGCGTGAGG
CTGATCACCG GCACGCTCGA CTACGGCCAG GGCCACGCCA CGCCGTTCGC GCAGGTGATG
AGCGCCCAAC TGGGCGTGCC GTTCGAGAGC GTCACGCTCG AACAGGGCGA CAGCGATCTC
GTCCACACCG GCAACGGCAC CGGCGGCTCG CGCTCGATCA CCGCGAGCGG CATGGCGATC
GTCGAGGCCG CCGCGCAGGT CATCGCCAAG GGCAAGGCCG CGGCGTCACA TCTGCTGGAA
ACCTCGGAAG CCGATATCGA ATTTTCGGGC GGGCGATTCA CCGTCGCCGG CACCGACCGC
AGCATCGGCA TCATCGAGCT GGCGCAGCGG CTGCGCGACA GCAAGATGCC CGACGGCGCG
CCGTCGTCGC TCGACGTCGA CCACACCGTC AAGGAAGTGC CGTCGACCTT CCCGAACGGC
TGCCACGTCG CCGAGGTCGA GATCGATCCC GACACCGGCG TCACCCAGGT GGTGCGCTAC
GTCGCGGTCA ATGATTTCGG CGTCGTGGTC AATCCGATGA TCGTCGCGGG CCAGTTGCAC
GGCGGCGTGG CGCAGGGCAT CGGCCAGGCG CTGATGGAGA AAGTGAGCTA CGACGCCGAC
GGCCAGCCGA TCACCGGCTC GCTGCAGGAC TACGCCCTGC CGCGCGCCGA GGATATTCCG
GCGATGACGA TCGGCGACCA TCCGGTGCCG GCCACCAACA ATCCGCTCGG CACCAAGGGC
TGCGGCGAAG CCGGCTGCGC GGGTAGCATG TCCACCGTGA TCAATGCCGC GCTCGACGCC
CTGCGAGATT TCGGCGTGAC CCATCTCGAC ATGCCGCTGA CCTCCGAGAA GGTCTGGCGG
GCGATCAAGG ACGCCAAGGC GACGCAGGCG GCTTGA
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| Protein sequence | MQDHTSNASL DTAIALQKFG VGQPVRRKED DTLVRGKGHY TDDFNLPGQL FAVMVRSPHA
HGVLRGINAE AARGMAGVRG VFTGADLASA NYAPFTCGLP LKNRDGTPLH QTNRHALATD
KVRFVGDPVA CVVADTLAQA RDAAEAVELD IEPLPAVTEA DEATKPGAPQ LYDHIENNVA
LDYHFGDAEA VNAAFASAAH VTRLDIENSR VAVVSMEPRA GLACYDRNDG RYTIQVPTQG
VAGNRNGLAK LLGVPNDKVR LLTGHVGGSF GMKNINYPEY ICILHAAKAL GRPVKWTDER
STAFLSDSHG RGQQIHAELA LDAAGKFLAI RISGTGNLGA YITGVAPLPL SLNIGKNIGS
VYRTPLLSVD IKCVLTNVTL MGAYRGAGRP EANYYLERLI DRAADEMSID RLTLRKRNFI
KPSQMPFKAC SGVTYDCGDF AGVFAHALEL ADYAGFSKRK KDSRKRGRLR GIAVGSYLEV
TAPPNSELGK IVFEADGRVR LITGTLDYGQ GHATPFAQVM SAQLGVPFES VTLEQGDSDL
VHTGNGTGGS RSITASGMAI VEAAAQVIAK GKAAASHLLE TSEADIEFSG GRFTVAGTDR
SIGIIELAQR LRDSKMPDGA PSSLDVDHTV KEVPSTFPNG CHVAEVEIDP DTGVTQVVRY
VAVNDFGVVV NPMIVAGQLH GGVAQGIGQA LMEKVSYDAD GQPITGSLQD YALPRAEDIP
AMTIGDHPVP ATNNPLGTKG CGEAGCAGSM STVINAALDA LRDFGVTHLD MPLTSEKVWR
AIKDAKATQA A
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