Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2256 |
Symbol | |
ID | 4022741 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2518554 |
End bp | 2519765 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637962451 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_569392 |
Protein GI | 91976733 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.777349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.277076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTCA TGAAATACGC GGCGGCGCTG ACGCTGGCCG CTCCGCTGCT GTTCGGCGCG TCCGCTTTCG CGCAACAGGG GCCGCTGAAG ATCGGCCTGC TCAGCGACTT CCAGTCGGTG TATTCCGACA TCGGCGGCGC CGGCAACGCC GAAGCCGCCA AGATGGCGAT CGAGGAGATG GGCGGCACGA TGTTCGGTCA GCCGATCGAA TTCCTCAGCG CCGACGTCCA GAACAAGCCC GACATCGCCG CGTCGCTGGC GCGGAAATGG TACGAGAACG AGGGCGTCGA CATGATCGTC GATCTGCCGA CCTCGGCCAC CGCGCTCGCC GCGATGGAGA TGTCGAAGCG GTTCGAGAAG ATCATGATCG TCACCGACGC TGCGTCGTCG GACATCACCG GAAAATCCTG CTCGCCCTAC ACCGCGCACT GGACCTACGA CACTTACTCG AATGCGCACA CCGTGGGCTC GGCGATCGTC AAGAACGGCG GCGATAGCTG GTTCTTCATC ACCGCCGACT ATCTGTTCGG CCATTCGATC GAACGCGACA CCGGCGAGGT GGTGAAGGCG GCCGGCGGCA AAGTGGTCGG CAATGCGCGG CATCCGTTGA ACAACGCCGA CTTCTCGTCG TTCCTGCTGC AGGCGCAGTC GTCCAAGGCC AAGATCATCG GCATGGCCAA TGGCGGCGGC GACACCATCA ACACCATCAA GCAGGCGGCG GAGTTCGGCA TTGTCGCCGG CGGCCAGAAG CTCGCCGGCA TCGTGATGTT CATCTCCGAC ATCCACAGCC TCGGGCTGAA GATGGCGAAC GGGCTGATCA TCACCGAAGC CTATTACTGG GACCTCAACG ACCGCACCCG CGCCTTCGGC AACAAGTACT TCGAGCGGAT GAAGCGGATG CCGACGATGA ACCAGGCCGC GACCTACAGC GCCACGCTGC ATTATCTCAA GGCGGTGAAG GCGGCCGGCA CGAAGGACAC CAAGACGGTG CTGGCGAAGA TGCGCGAAAT GCCTGTGCGC GACGCCTTCA CCGACAACGG CTTCCTGCGC GAGGACGGCC GCATGGTGCA CTCGATGTTC CTGTTCGAGG TGAAGAAGCC GGAAGAATCC AAGGCGCCGT GGGACTACTA TAAGGTGCTC GCCGAAGTCC CCGGCGACCA GGCGTTCCGT CCGATGAAGG ATGGCGGTTG CCCGCACGTG AAGAAGGATT GA
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Protein sequence | MRFMKYAAAL TLAAPLLFGA SAFAQQGPLK IGLLSDFQSV YSDIGGAGNA EAAKMAIEEM GGTMFGQPIE FLSADVQNKP DIAASLARKW YENEGVDMIV DLPTSATALA AMEMSKRFEK IMIVTDAASS DITGKSCSPY TAHWTYDTYS NAHTVGSAIV KNGGDSWFFI TADYLFGHSI ERDTGEVVKA AGGKVVGNAR HPLNNADFSS FLLQAQSSKA KIIGMANGGG DTINTIKQAA EFGIVAGGQK LAGIVMFISD IHSLGLKMAN GLIITEAYYW DLNDRTRAFG NKYFERMKRM PTMNQAATYS ATLHYLKAVK AAGTKDTKTV LAKMREMPVR DAFTDNGFLR EDGRMVHSMF LFEVKKPEES KAPWDYYKVL AEVPGDQAFR PMKDGGCPHV KKD
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