| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2251 |
|---|
| Symbol | |
|---|
| ID | 4022736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2512726 |
|---|
| End bp | 2513970 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637962446 |
|---|
| Product | HI0933-like protein |
|---|
| Protein accession | YP_569387 |
|---|
| Protein GI | 91976728 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2081] Predicted flavoproteins |
|---|
| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.294962 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0473731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACG CTTCCACCAT CGACGTCGCC GTGATCGGCG CCGGACCTGC GGGCCTGATG
GCGGCGGAGG TGGCGGCGAA AGGCGGCGCG CGCGTGACCG TGTTCGACGG CATGAGCTCG
GCGGCGCGGA AATTCTTGCT CGCCGGCCGC GGCGGGCTCA ATCTCACCCA CAGCGAACCG
CTGGCCGATG TCCTCGAACG CTACGGCGCG GCGCAGCAAA GGCTGCGGCC GGCGATCGAA
GCGTTTCCGC CGGATGCGCT GCGCGGCTGG GCGGAGGAGC TCGGTCAGCC GACTTTCGTC
GGCTCCAGCG GCCGGGTGTT TCCGGTGACG ATGAAGGCCT CGCCGCTGCT GCGCGCCTGG
CTGCGGCGGC TGGATGCGCA GGGCGTGCAA CTGAAGCTGC GGCATCGCTG GACCGGCTGG
GACGACAACG GCCGATTATT GTTCGACACG TTCGACGGGC CGCGCGCCAT CGCAGCGCGT
GCGACCGTGC TGGCGCTCGG CGGCGCGAGC TGGCCGAAGC TCGGCTCCGA TGGCGGCTTC
GTCGATCTGC TGGCGGCGAA AGGCATCGCG ATCGCGCCGC TGAAGCCGGC GAATTGCGGA
TTCACGGTTG ATTGGTCGGA GTTGTTCGCC GAGAAGTATC AAGGAACGCC GCTGAAGAAC
ATCGCGCTGT CATGCGGCGG GCGCGCCATT CGCGGTGAGG CGATCGTCAC CAGAACCGGC
CTCGAAGGCG GCGCGGTCTA CGCGCTGTCG GCCGGCTTGC GCGATGCGAT CCTCGCGGAT
GGCGAGGCGA CGCTGATGAT CGCGCTGCGG CCAGATCTTT CAGCCGACGA ACTGACGTCG
AGACTGACGA AGCCCAAAGG CAAGCAGTCG CTGTCGACCT TTCTGCGCAA GGCGGCGGGG
CTTCCGCCGG CCGGCATCGG ACTGCTGCAG GAGGCCGCGC ACCGGCAGGG ACGATCATTG
GCGTCACTGC CGCCGGCCGA ATGCGCCGCG CTGATCAACG CCGTGCCGGT GCGGTTGACA
GGCATCGCTC CGATCGCGCG GGCGATCTCG ACGGCGGGCG GCATCGCCTT CGCCGAATTG
GACGACACTT CCATGCTGCG TAAATTGCCC GGCGTGTTCG CGGCCGGCGA GATGCTGGAT
TGGGAAGCGC CGACCGGCGG CTATCTGCTG ACAGCATGTT TCGCGACGGG GGCCGCAGCG
GGCCGCGGCG CGCTGGCGTG GCTGGGGAGA AAATCTACTG ACTAA
|
|---|
| Protein sequence | MTDASTIDVA VIGAGPAGLM AAEVAAKGGA RVTVFDGMSS AARKFLLAGR GGLNLTHSEP
LADVLERYGA AQQRLRPAIE AFPPDALRGW AEELGQPTFV GSSGRVFPVT MKASPLLRAW
LRRLDAQGVQ LKLRHRWTGW DDNGRLLFDT FDGPRAIAAR ATVLALGGAS WPKLGSDGGF
VDLLAAKGIA IAPLKPANCG FTVDWSELFA EKYQGTPLKN IALSCGGRAI RGEAIVTRTG
LEGGAVYALS AGLRDAILAD GEATLMIALR PDLSADELTS RLTKPKGKQS LSTFLRKAAG
LPPAGIGLLQ EAAHRQGRSL ASLPPAECAA LINAVPVRLT GIAPIARAIS TAGGIAFAEL
DDTSMLRKLP GVFAAGEMLD WEAPTGGYLL TACFATGAAA GRGALAWLGR KSTD
|
|---|
| |