Gene RPD_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2248 
Symbol 
ID4022733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2510041 
End bp2511015 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content69% 
IMG OID637962443 
Productzinc-binding alcohol dehydrogenase 
Protein accessionYP_569384 
Protein GI91976725 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.711128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.154635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAAGG CGGTGGTGTG CCGCGAACTC GGTCCGCCCG AGGTGTTGCG GTTGGAAGAG 
ATCGAACGCA AGCCGTTGCA GGCGGGTGAG GCGCGGGTCG CGATCCGCGC CGCGGGCATC
AACTTTCCCG ATATCCTGAT GTGCGCCGGC GAGTATCAAC TCAAGCCCGA ACTGCCGTTC
ATTCCCGGCG TCGAGGCGGC CGGCGACGTG ATCGAGATCG GCGAGGGCGT CACCAACGCC
AAGGTCGGCG ACCGGGTGAT CGTCAAGCTG CGGTTCGGCG CCTATGCGGA GGAGGTCGCG
GTGGCGGCGT CGCAGCTGAC GCCGATGCCG CCGAATTTCG ACTACGCGGA GGCCGCGACG
TTTCTCGCCG GCCACGGCAC CGCCTGGCAC GGGCTGGTGG ATCGCGGGCA TCTGCAAAAG
GGTGAAGTGC TGCTGGTGCA CGGCGCCGGC GGCGGCGTCG GCCTTGCCGC GGTCGAGCTC
GGCAAATATC TCGGCGCCAC CGTGATCGCG GCGGCGTCCT CCGAGGAGAA GCTCGAGGTG
GCGCGCGTGC GCGGCGCCGA TCATGGCGTC CTCTACAGCC GCGAGCCGTT TCGCGATGCC
GTGAAGCGTA TCACCGGTGG CCGCGGCGCC GATGTGGTGT TCGATCCGGT CGGCGGCGAG
ATCTTCGAGG ACAGCGTGCG TTGTATCAAT TGGGGCGCGC GGCTGCTGAT CGTCGGCTTC
ACCGGCGGCA TCGGTCTCGC GCGCACCAAT CTGATCCTGA TGAAGGGCGC GAGCGTCGTC
GGCGTCCGCG CCGGCGAGGC GGTGCGGCGC GATCCCGCCC TCGGCGAGCA GCGCATCGCC
GGACTGTTCG ATCTCGCCGC GCAAGGCAAG ATCCGTCCGA ACGTGTCGCA TCGGCTGCCG
CTCGCGCAAT GGGCGAGTGG GATGCGGCTG TTGATCGAAC GCCGCGCCAT CGGCCGGGTT
GCGCTGCTGC CGTAG
 
Protein sequence
MPKAVVCREL GPPEVLRLEE IERKPLQAGE ARVAIRAAGI NFPDILMCAG EYQLKPELPF 
IPGVEAAGDV IEIGEGVTNA KVGDRVIVKL RFGAYAEEVA VAASQLTPMP PNFDYAEAAT
FLAGHGTAWH GLVDRGHLQK GEVLLVHGAG GGVGLAAVEL GKYLGATVIA AASSEEKLEV
ARVRGADHGV LYSREPFRDA VKRITGGRGA DVVFDPVGGE IFEDSVRCIN WGARLLIVGF
TGGIGLARTN LILMKGASVV GVRAGEAVRR DPALGEQRIA GLFDLAAQGK IRPNVSHRLP
LAQWASGMRL LIERRAIGRV ALLP