| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2247 |
|---|
| Symbol | |
|---|
| ID | 4022732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2509409 |
|---|
| End bp | 2510041 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637962442 |
|---|
| Product | DSBA oxidoreductase |
|---|
| Protein accession | YP_569383 |
|---|
| Protein GI | 91976724 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3917] 2-hydroxychromene-2-carboxylate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.281612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.141895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAT TCTTCTTCGA CTGTTCCAGT CCCTGGACCT ATCTCGCTTT CCACAACATC
CAGCCGCTGG CCAAGGAGGC GGGGGTCGAG ATCAGTTGGC GGCCGATCCT GGTCGGGGGC
ATCTTCAATT CGGTCAATCC GAGTGTCTAT GAATCCCGCA AGACGCCGGT GCCGTTGAAG
GCGCGCTACA TGCTGAAGGA TCTCGGCGAC TGGTCGCGCT CGGCAGGTCT CGCGATCAAA
ATGCCGCCCT CGGTGTTTCC GGTGAACAGC GTCAAGGCGA TGCGCGGCTG CCTGGCGCTG
CTGCGCGACA GGCCGGACGC GATGGCGCCG TTCGCGACCG CGGTGTTCGA AGCCTATTGG
GGCGACGATC AGGACATTTC CAACGACGAG GTCCTGAGCG CGATCTGCAA GCGCGTCGGT
CTCGATCCGC AGGCGTTGTT CGCGGCGATT TCCGAGCCCG CGATCAAGGA TCAGCTCAAG
GCCAACACCG ACGAGGTGAT GGCGCGCGGC GGCTTCGGCT CGCCGACGAT CTTTGTCGAC
ACCACCGACA TGTATTTCGG CAACGATCGG CTGCCGCTGG TGCGCGAGGC CTTGGCGCGT
TGCAAATCCA GCGCATCGGC GAGCGCCGCC TGA
|
|---|
| Protein sequence | MLEFFFDCSS PWTYLAFHNI QPLAKEAGVE ISWRPILVGG IFNSVNPSVY ESRKTPVPLK
ARYMLKDLGD WSRSAGLAIK MPPSVFPVNS VKAMRGCLAL LRDRPDAMAP FATAVFEAYW
GDDQDISNDE VLSAICKRVG LDPQALFAAI SEPAIKDQLK ANTDEVMARG GFGSPTIFVD
TTDMYFGNDR LPLVREALAR CKSSASASAA
|
|---|
| |