Gene RPD_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2239 
Symbol 
ID4022724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2502125 
End bp2503069 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content64% 
IMG OID637962434 
Producthypothetical protein 
Protein accessionYP_569375 
Protein GI91976716 
COG category[S] Function unknown 
COG ID[COG2307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.580599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.384966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCGC GCACCGCTGA AAACCTGTTC TGGCTCGCCC GCTATGTCGA ACGCGCGGAG 
TATCTGGCGC GCACCATCGA TGCGACGCTG CGCGTCACCG CACTACCGAA CACCTATTCC
GGCCAGGGCA ACGAGTGGGA CTCCGCGCTG CTGACCGCCG GCGTCGCCGC CAGCTTCTAC
AATCACTACG ACGAGGCCAA CGAGACCAAC GTCGTCGAGT TTCTGTCGTT CGCGCCGTCC
AATCCGTCGT CGATCCTCAA CTGCATCGAG GCCGCGCGAC TCAACGCGCG CTCGGTGCGC
ACCGCGCTGA CCAGCGAGAT GTGGGCGACC ATCAACAGCG CCTGGATCGA GCTGCAGGAG
AACTGGGGCA AGGGCGCCAA GACCCGCGAA CAGCTCTCCG GCTTCCTGCG CTTCGTGCAG
GAAACCTCGC TGCGGTTCGA CGGCTCGGCC TATCGCACCA TGCTGCGCAA CGACGCCTAT
TGGTTCTCGC GGCTCGGCGT GCATCTCGAA CGCGCCGACA ACACCGCGCG GATCCTCGAC
GTCAAATATC ACTTGCTCCT GCCCGAGGAG GAGCATGTCG GCGGCCCGCT CGATTACTAT
CAGTGGTCGT CGATCCTGCG CTCGGTCTCG GCGCTGACCG CCTATCACTG GGTCTATCGC
CAGACCCTGA AGCCGTGGCT GATCGCCGAT CTGTTGATCC TCAATGACAG CCTGCCGCGC
TCGCTGGCGT CCTGCTACGG CAACCTGGTC CGCAATCTCG ATCAGATCGG CGTCGCCTAT
GGCCGCCAGG GTCCGGCGCA GCGCCATGCG CGGGGCATCC GCAACCGGCT CGAGCATTCC
GACATGGAAG ACATCTTCCA GCGCGGCGTG CACGAATTCA TCCAGGAGTT CCTGGCCGAC
AACACCCGCC TGGGCGAGAT CGTCGCCAAG CAATATCTGA TCTAA
 
Protein sequence
MLSRTAENLF WLARYVERAE YLARTIDATL RVTALPNTYS GQGNEWDSAL LTAGVAASFY 
NHYDEANETN VVEFLSFAPS NPSSILNCIE AARLNARSVR TALTSEMWAT INSAWIELQE
NWGKGAKTRE QLSGFLRFVQ ETSLRFDGSA YRTMLRNDAY WFSRLGVHLE RADNTARILD
VKYHLLLPEE EHVGGPLDYY QWSSILRSVS ALTAYHWVYR QTLKPWLIAD LLILNDSLPR
SLASCYGNLV RNLDQIGVAY GRQGPAQRHA RGIRNRLEHS DMEDIFQRGV HEFIQEFLAD
NTRLGEIVAK QYLI