| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2222 |
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| Symbol | |
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| ID | 4022707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2487997 |
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| End bp | 2488749 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637962417 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_569358 |
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| Protein GI | 91976699 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.981118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.145853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGGA CTCTGCAAGG CAAGGTGGCG CTGGTGACCG GCGCCTCGAA AGGCATCGGC
GCCGAGATCG CGCTGCAGCT CGCCGCCCAA GGCGCCGCCG TCGCAGTCAA CTACGCCTCC
AGCAAGGACG GCGCCGACGC GGTGGTGGCG AAGATCGCCG CCGCGGGCGG CAAGGCCGTC
GCGGTGCACG GCAACCTCGC CGATCCGCAA GGCGCCAAGG CCGTGGTCGA CGCCACCGTG
CAGGCGCTCG GCCCGATCGA CGTGCTGGTG AACAATGCCG GCGTCTACGA GATGCTGCCG
CTCGATGCGA TCACGCCGGA GCATTTCCAC CGTCAGTTCG ATCTCAACGT GCTGGGCCTG
CTGCTGGTGA CGCAGGAAGC CGCCCGGCAG TTCAACTCGA ATGGTGGCAG CATCGTCAAC
ATCTCCTCCG GCGTCTCGAC GCTGGCGCCG CCGAATTCCG CGGTCTACAC CGCGACCAAG
GCGGCGGTGG ATGCGATCAC CGCGGTGCTG GCGCGGGAAC TGGCGCCGCG CAAGATCCGC
GTCAACGCCG TCAATCCCGG CATGGTCGTC ACCGAAGGCA TCAAGGCGGC CGGGCATGAC
CAGGGCGAGA TGCGGCAATG GGTCGAAGCG ACGACGCCGC TCGGCCGCGT CGGCAAGGCC
GAGGAAATCG CCGCGGTCGT CACGTTCCTT GCGAGCGAAG GCGCCTCTTA CGTCACTGGC
GAAACGCTGC ATGTAACGGG TGGACCGCGT TAA
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| Protein sequence | MTRTLQGKVA LVTGASKGIG AEIALQLAAQ GAAVAVNYAS SKDGADAVVA KIAAAGGKAV
AVHGNLADPQ GAKAVVDATV QALGPIDVLV NNAGVYEMLP LDAITPEHFH RQFDLNVLGL
LLVTQEAARQ FNSNGGSIVN ISSGVSTLAP PNSAVYTATK AAVDAITAVL ARELAPRKIR
VNAVNPGMVV TEGIKAAGHD QGEMRQWVEA TTPLGRVGKA EEIAAVVTFL ASEGASYVTG
ETLHVTGGPR
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