Gene RPD_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2220 
Symbol 
ID4022705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2486234 
End bp2486545 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content68% 
IMG OID637962415 
Producthypothetical protein 
Protein accessionYP_569356 
Protein GI91976697 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.595512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.241423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCAC GAACACTCAC CAGCGCAATT GCTCTGACCA CGCTGCTTGG CAGCGGCGCG 
GCTCTGGCTC AGGAGCGGGG ATCGGAGGCG CAGCGCGAAG CCTGCACGCC CGACGCGTTG
CGGCTGTGCA GCCAGTACAT TCCTGATGCG GGGCGGATCG AGAGCTGCCT GCGTGACGCC
GGGCCGCGGC TGAGCCAGGC TTGCTACGTG GTGTTCCATC CGCCGAGCGA GACCAGAGCG
CCGCCGATGC GCACGGTGCG ACGCCAGCAG CGTCCACCAC AGCAGCAGGT CGAGGACGTC
GAGAACCAGT AA
 
Protein sequence
MPSRTLTSAI ALTTLLGSGA ALAQERGSEA QREACTPDAL RLCSQYIPDA GRIESCLRDA 
GPRLSQACYV VFHPPSETRA PPMRTVRRQQ RPPQQQVEDV ENQ