Gene RPD_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2215 
Symbol 
ID4022700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2480027 
End bp2481457 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID637962410 
Productaldehyde dehydrogenase 
Protein accessionYP_569351 
Protein GI91976692 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.21786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.328694 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACC GCATGCAATT CTACATCGAC GGCGCCTGGG TCGATCCCGT CGTCAAGAAG 
TCGACGCCGG TCGTCAATCC AGCGACCGAG GAGGCGATGT ATGAGATTGC ACTCGGCTCC
AAGGCCGATG TCGACAAGGC GGTCGCAGCG GCCAAGCGTG CGTTCGAAAC CTTCTCCCAG
ACCAGCCGCG AGGAGCGCAT CGCGCTGCTC GAGAAGATTA TCGGGATCTA CAAGGGCCGG
ATGAAGGAAA TCGGCGCCGC GGTGTCCGAC GAAATGGGCG CGCCGCTGCC GATGGCCGAG
AAGATGCAGG CCGGCGCCGG CCTGGGCCAC ATCATGTCGA CGCTCGACGT GCTGAAGAAT
TATGCCTTCG AGGAGCCGTT GGGCTCGGCG ATGATCGTGC GTGAACCGAT CGGCGTCGTC
GGCATGATCA CGCCGTGGAA CTGGCCGCTG AACCAGATCG CCTGCAAGGT CGCGCCGGCG
CTCGCCGCGG GCTGCACCAT GATTCTCAAG CCGTCGGAAT TCACCCCGAC CTCGGCGCTG
ATTTTCGCCG AGATCCTGCA TGAAGCCGGC GTGCCGAAGG GCGTGTTCAA CCTGGTCAAC
GGCCTCGGCC CGGAGGTCGG CGCCGCGATG AGCGAGCATC CCGACATCGA CATGATCTCG
TTCACCGGCT CGACCCGCGC GGGCATCGAC GTCGCGCAGC GCTCCGCGCC GACGGTGAAG
CGCGTCAGCC AGGAACTCGG CGGCAAATCG CCGAACGTGA TCCTCGACGA CGCCGATCTC
ACCAAGGCGG TGACCGGCGG CGTGATGCAC ATGTTCAACA ATTCCGGCCA GTCGTGTAAT
GCGCCGAGCC GGATGATCGT GCCGCTGTCG AAGATGAAGG AGGTCGCCGC GATCGCCAAG
GGCGTCGCGG AGAAGACCAA GGCGGGCGAT CCGCGCGGCG AGGGCACGAC GATCGGTCCG
GTGGTCAATC GCGGCCAGTG GGACAAGATC CAGTCGTTGA TCAACAAGGG CATCGAGGAA
GGCGCGACGC TGGTCGCCGG CGGCCCTGGC CTGCCGGAGG GCGTCAACAA GGGCTTCTAT
GTCCGCCCGA CCGTATTCGC CGACGTCACC GACAACATGA CCATCGCACG CGAGGAAATC
TTCGGGCCGG TGCTGGTGAT CATGGGTGCG AAGGACGAGG ACGAGGCGGT CAAGCTCGCC
AACGACACGC CCTATGGCCT CGCGGGCTAT GTCTCGGCCG GTTCGGTCGA GCGGGCGCGC
AAGGTCGGTC GCCAGATCCG CGCCGGCAAC GTCAATTTGC AGGGCGTTCC GAACGAACGC
ACTGCGCCGT TCGGCGGCTA CAAGCAGTCC GGTAACGGCC GCGAATGGGG CAAGTTCGGC
CTCGAGGAAT ATCTCGAGGT CAAGGCGATC GCCGGCTTCA ACGCCGCGTA A
 
Protein sequence
MVNRMQFYID GAWVDPVVKK STPVVNPATE EAMYEIALGS KADVDKAVAA AKRAFETFSQ 
TSREERIALL EKIIGIYKGR MKEIGAAVSD EMGAPLPMAE KMQAGAGLGH IMSTLDVLKN
YAFEEPLGSA MIVREPIGVV GMITPWNWPL NQIACKVAPA LAAGCTMILK PSEFTPTSAL
IFAEILHEAG VPKGVFNLVN GLGPEVGAAM SEHPDIDMIS FTGSTRAGID VAQRSAPTVK
RVSQELGGKS PNVILDDADL TKAVTGGVMH MFNNSGQSCN APSRMIVPLS KMKEVAAIAK
GVAEKTKAGD PRGEGTTIGP VVNRGQWDKI QSLINKGIEE GATLVAGGPG LPEGVNKGFY
VRPTVFADVT DNMTIAREEI FGPVLVIMGA KDEDEAVKLA NDTPYGLAGY VSAGSVERAR
KVGRQIRAGN VNLQGVPNER TAPFGGYKQS GNGREWGKFG LEEYLEVKAI AGFNAA