| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2212 |
|---|
| Symbol | |
|---|
| ID | 4022697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2475526 |
|---|
| End bp | 2476473 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637962407 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_569348 |
|---|
| Protein GI | 91976689 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.193478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.474349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCATCA CCTCGCCACC TGTGACCGAC GCCGCTCGTC GCCTGACCCA GCGCCATGCC
GATCATCCGT TGCGCGGCAT TGCGCTGATC GTCGCCTCCA CGGTGTTTCT CGCCTGTTCC
GACACGTTGG CGAAGTATCT CGGGCGCACG CTGCCGCCGA TCGAGATCGG CTGGATCCGA
TTTCTGGTGT TTCTGCTGAT CATGCTGCCG GTGGCGCTGG CATCGTCGGA ATCGCCGCTG
CGCTCGGTGC GGCCGAAGCT GCAGGTGCTG CGGGCGCTGG CGCTGGTGGC GTCGTCGGTG
CTGTTCATCA CCGGCCTGCG CTTCCTGCCG ATCGCCGAGG CCTCGGCGAC CTCGTTCGTC
GCGCCGCTGT TCGTCACCGC GCTGTCGATC GTTCTGCTCG GCGAGGCGAT CGGCATCCGG
CGCTGGGTGG CGACGCTGGT CGGATTGATC GGCGTGCTGA TCGTGATCCG GCCGGGCTCG
TCGACCTTCA ATCCCGCGGT GATCCTGCCG ATCCTCTCGG CGTTGTGCTG GGCGATCACG
CTGATCCTGA CCCGAATGAT CAGCGGCGCC GATCGCGCCG TGGTCACCAT GACGTTTTCC
GCGCTGGTCG GCTTCCTCGC GCTGAGCGCA ATGGTGCCGT TCGTCTGGGT GACGCCGAGC
TGGACCGACA TCGCGATCGG TGTCGGCGTC GGACTGGCGT CGACCATCGG GCAGTGGATC
GTGGTGCTGG CGTTCCGCTA CGCCGACGCA TCGGCGCTGG CGCCATTCTC CTACAGTCAG
CTGTTGTGGG TCACGATTCT TGGATACGCG GTGTTCAGCG AAATTCCGGA TGCGTGGACC
TTCGTAGGCG CGGTGGTGAT CATCTGCAGC GGCGTCTACA TCGCCCATCG CGAGCGACTG
CGGCGCAAGC AGAACGTGGC GCCGGCCGAG CCGAATCCGA ATCCGTAG
|
|---|
| Protein sequence | MTITSPPVTD AARRLTQRHA DHPLRGIALI VASTVFLACS DTLAKYLGRT LPPIEIGWIR
FLVFLLIMLP VALASSESPL RSVRPKLQVL RALALVASSV LFITGLRFLP IAEASATSFV
APLFVTALSI VLLGEAIGIR RWVATLVGLI GVLIVIRPGS STFNPAVILP ILSALCWAIT
LILTRMISGA DRAVVTMTFS ALVGFLALSA MVPFVWVTPS WTDIAIGVGV GLASTIGQWI
VVLAFRYADA SALAPFSYSQ LLWVTILGYA VFSEIPDAWT FVGAVVIICS GVYIAHRERL
RRKQNVAPAE PNPNP
|
|---|
| |