Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2209 |
Symbol | |
ID | 4022694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2472057 |
End bp | 2473319 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962404 |
Product | beta-lactamase |
Protein accession | YP_569345 |
Protein GI | 91976686 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.683727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.729907 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCCC AAGCCCAGAA GCCTCGATCC CCCGCAACCG GCTCGGCCGC TAGCGCTGGC ATGTCCGAGA CGGCGCTGAA GCGGATCGAC GATCACCTGA AGCGGGTCTA CGTCGATCCC GGCAGGTTCG CCGGCGCCCA GACGCTGGTC TATCGCCGCG GCCAGATCGT TTATCAATCG TCGCTGGGCT ACGCCGACCG TGAGCGCAAA GCGCCGATCA AGGACGACAC CATCTTCCGG ATCTATTCGA TGACCAAGCC GATCACCTCG GTCGCGCTGA TGATGCTGTT CGAGGAAGGT CGCATCCAGC TCGACGATCC GGTCGCGAAA TACATTCCGG AATGGGCCAA TCTCGGCGTA TTTCAGGCCG GCATCGCGCC TGCGTTTCTG ACCAGACCGC CGGCGCGGCC GATGCAGATC GTCGATCTGT TGCGGCATAC GTCGGGCCTC ACCTACGGCT TCCAGAACCG CACCAATGTC GACGCCGCCT ATCGCGACAA GGGGATCGGC GCGTTCGAAA AGGCCGGCAC GCTGGACTGC TGGATCGCCG ATCTCGCGAA GATTCCGCTG GAGTTCTCAC CGGGCGAGGC TTGGAACTAC TCGGTGTCGA CCGACGTGCT CGGCTACATC ATTCAGAAGA TCAGCGGCAT GCCGTTCGAG CAATTCGTCA GGCAGCGAAT TCTCGATCCG CTCGGCATGA CCGACACCGA CTTCTTCGTC CCCGAAGCGA AAGCGCACCG CCTCGCCGCC TGCTACTCCG CCGATGGCGA GGGCGGCATG ACGTTGCAGG ATGATCCAGC CACCAGCAGC TTCCTGGCGC CGCCCGATCT GATCTCCGGC GGCGGCGGGC TGGTCTCGAC CACGGCGGAC TATCTTGCAT TCTGCCGCGC GCTGCTCAAT GGCGGCGAAC TCGGCGGCGT CCGCCTGATC GGCCCGAAGA CCCTCAGGCT GATGACCACC AACCACCTCC CCGGCAATCG CGACCTCACC GAGATGTCGC GCTCGATGTT CAGCGAAGCA ACCAATGCCG GCATCGGCTT CGGCCTCGGC TTCGCCGTCA ACATGAACCC GGCCTCGACG CTGCTTCCCG GCAGTGTCGG CGAGTATTAT TGGGGCGGCG CCGCCTCGAC CGCGTTCTGG ATCGATCCGG CCGAGGACCT GATCACCATC TTCATGACCC AGCTTCTGCC GTCGAGCAGC TATCCGATCC GCCGCGAGCT GCGCGCGCTG GTCTATGGCG CGATCACCGA GAGCAATCTC TAA
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Protein sequence | MQAQAQKPRS PATGSAASAG MSETALKRID DHLKRVYVDP GRFAGAQTLV YRRGQIVYQS SLGYADRERK APIKDDTIFR IYSMTKPITS VALMMLFEEG RIQLDDPVAK YIPEWANLGV FQAGIAPAFL TRPPARPMQI VDLLRHTSGL TYGFQNRTNV DAAYRDKGIG AFEKAGTLDC WIADLAKIPL EFSPGEAWNY SVSTDVLGYI IQKISGMPFE QFVRQRILDP LGMTDTDFFV PEAKAHRLAA CYSADGEGGM TLQDDPATSS FLAPPDLISG GGGLVSTTAD YLAFCRALLN GGELGGVRLI GPKTLRLMTT NHLPGNRDLT EMSRSMFSEA TNAGIGFGLG FAVNMNPAST LLPGSVGEYY WGGAASTAFW IDPAEDLITI FMTQLLPSSS YPIRRELRAL VYGAITESNL
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