Gene RPD_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2208 
Symbol 
ID4022693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2470573 
End bp2472027 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content68% 
IMG OID637962403 
Producthypothetical protein 
Protein accessionYP_569344 
Protein GI91976685 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.991586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATTC AGGCACTGGA ATCGTCCGAG ACTGCCGGAT CCAAGGGCGG CGTGCTGCCG 
TTGCTGATCG GCTGCGGCGT GCTGGTGTTC CTGCTGGTCA CCGGCGAGGC GCTGCTGCAG
GACTCCGACA TCTTCTGGCA GATCGAGACC GGCCGCTGGA TTCTCGCGCA CGGCGCGGTG
CCGACCGCCG ATTTGTTCTC GTTCACCAAA GCCGGCGCGC CATGGCTGTC GAGCTCCTGG
CTGGCGCAGG TGATTTTCGC GCTCGCGATG CAGGCGGGTT GGGCCGGGCC GGTGATCGTG
ACGGCGCTGG CGGCGGCGGC TGCGTTCGCG CTGTTTGCCG CCTATCTCGA ACGCCATGCG
AGTGCGCTGC TGACAACGGC GCTGACGCTG CTCGCGGTGG CGCTGACGGT GCCGCATCTG
TTAGCGCGGC CGCACGTGCT TGCGCTGCCG TTGCTGGTCG CATGGTTCAT CGGACTGATC
GACGCCGCCG ACCGCAAGGC CGCGCCGCGA TGGCCGCTGC TGATCGTGAT CGCGCTGTGG
GCGAACATCC ATGGCGGATT CGGGCTTGGC CTGGTGCTGA TCGGGCCGAC CGCGCTCGAG
GCGCTGCGCC AGGCGGCGCC GGCGCAACGT CTGTTACTGG CATTGCGCTG GGCCGCCTTC
GGCGTCGCCG CGCTGGTTGC CTGCTGCGCC ACGCCCTATG GCTGGAACAC GCTGATCGCG
GCCAGCAAGA TCCTCAGCCT CGGCGAGGTA TTGACGACGG TGGCGGAATG GTCGCCGCCG
GATTTCGGCC GGTTCGGCCC GTTCGAGGCG AGCATCCTGG CGCTGTTCGG CGTCGCGCTG
TGGCGCGGGC TGACATTGCC TTGGCCGCGA CTGCTGCTGG TGCTCGGGCT GCTGCACATG
GCGCTCGGCC ACATCCGCAG CGTCGAGACG TTCGCGTTGC TGGTTCCAAT TGTGCTGGCG
CGGCCATGGG CGGAGCAGCT TGCGCCGCGC AGCGTTGCGC CGCCTGTCGC CAGAAGCGAA
TTTGCGCTGC CCGGTTGGGC CGTCGCGACG GCTGTGGTCA CGATCATCGC CGCAACTGTC
GCTGTCGCGC CGCGGCTGAA TTATCGCTTC GTCGCGACGC AGATTCCGGA GCAGGCGCTG
GCCGCAGCGC AGCAGCACGG CGCCAAGCAC ATTCTCAATG CCTATGAGTT CGGCGGCTAT
CTGATTTCCC GTCATGTCCC GGTGTTCATC GACGGCCGCG CCGAGCTGTA TGGCGAGGCG
ATGGTGATGG ACATGTTCCG CGCCGCGGCG GGCCGCGATG CAGGCGCACT CGATCGGCTC
GTCGACAATT ACAATGTCGA TGCCACCTTG CTGCCGGCGC AGCAGCCGAT TGTGGGTCTG
ATGGACCGTC GTCCCGGCTG GCGTCGCCTC CATGCCGACG ACATCGCCGT CGTGCATGTG
CGCGACGGCC TCTGA
 
Protein sequence
MTIQALESSE TAGSKGGVLP LLIGCGVLVF LLVTGEALLQ DSDIFWQIET GRWILAHGAV 
PTADLFSFTK AGAPWLSSSW LAQVIFALAM QAGWAGPVIV TALAAAAAFA LFAAYLERHA
SALLTTALTL LAVALTVPHL LARPHVLALP LLVAWFIGLI DAADRKAAPR WPLLIVIALW
ANIHGGFGLG LVLIGPTALE ALRQAAPAQR LLLALRWAAF GVAALVACCA TPYGWNTLIA
ASKILSLGEV LTTVAEWSPP DFGRFGPFEA SILALFGVAL WRGLTLPWPR LLLVLGLLHM
ALGHIRSVET FALLVPIVLA RPWAEQLAPR SVAPPVARSE FALPGWAVAT AVVTIIAATV
AVAPRLNYRF VATQIPEQAL AAAQQHGAKH ILNAYEFGGY LISRHVPVFI DGRAELYGEA
MVMDMFRAAA GRDAGALDRL VDNYNVDATL LPAQQPIVGL MDRRPGWRRL HADDIAVVHV
RDGL